RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SERPINB11Q96P15 392 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 OLFM3Q96PB7 478 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 BEX2Q9BXY8 128 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 RHOFQ9HBH0 211 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 ZNF780BQ9Y6R6 833 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 SETD1AO15047 1707 aaKnown RBP1.35□□□□□ -2.19
CD47-203ENST00000398258 POLR3AO14802 1390 aaPredicted RBP1.34□□□□□ -2.19
CD47-203ENST00000398258 BAZ2AQ9UIF9 1905 aaKnown RBP1.34□□□□□ -2.19
CD47-203ENST00000398258 IGHV2-26A0A0B4J1V2 119 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 FAM183AA6NL82 134 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 H3BQ85 93 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 SCN2BO60939 215 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 IGKV5-2P06315 115 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 GP1BAP07359 652 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 SOD3P08294 240 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 CGB3P0DN86 165 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 CGB7P0DN87 165 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 ZNF35P13682 527 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 HRES1P13985 223 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 PLTPP55058 493 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 CCL23P55773 120 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 OR2B6P58173 313 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 OR10A3P58181 314 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 SLAMF1Q13291 335 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 BIKQ13323 160 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 TPBGQ13641 420 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 TRIP13Q15645 432 aaPredicted RBP1.34□□□□□ -2.19
CD47-203ENST00000398258 GOLGA7BQ2TAP0 167 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 TMEM249Q2WGJ8 235 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 UBE2NLQ5JXB2 153 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 ERICH5Q6P6B1 374 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 WDR59Q6PJI9 974 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 AHSA2Q719I0 299 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 ADM2Q7Z4H4 148 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 AMN1Q8IY45 258 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 ZFP82Q8N141 532 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 OR2K2Q8NGT1 345 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 TVP23CQ96ET8 276 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 OR2V2Q96R30 315 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 TM2D3Q9BRN9 247 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 ZNF586Q9NXT0 402 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 ENPP5Q9UJA9 477 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 ZNF706Q9Y5V0 76 aaPredicted RBP1.34□□□□□ -2.19
CD47-203ENST00000398258 R4GN34 69 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 DYSFO75923 2080 aa1.34□□□□□ -2.19
CD47-203ENST00000398258 ARAP3Q8WWN8 1544 aa1.34□□□□□ -2.2
CD47-203ENST00000398258 TRAV8-3A0A0A6YYJ7 113 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 A0A1B0GTI1 187 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 ERICH4A6NGS2 130 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 F5H5P2 479 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 MKRN2OSH3BPM6 223 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 C15orf65H3BRN8 121 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 FABP7O15540 132 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 ENSAO43768 121 aaKnown RBP1.33□□□□□ -2.2
CD47-203ENST00000398258 ENTPD6O75354 484 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 SOX14O95416 240 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 IGHV3-53P01767 116 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 P0C880 135 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 SCGB1C2P0DMR2 95 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 NQO2P16083 231 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 CD34P28906 385 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 UGT2B10P36537 528 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 ACOT2P49753 483 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 AQP5P55064 265 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 FOXA1P55317 472 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 HBG1P69891 147 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 HBG2P69892 147 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 PRDX1Q06830 199 aaKnown RBP1.33□□□□□ -2.2
CD47-203ENST00000398258 XRCC4Q13426 336 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 ACTBL2Q562R1 376 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 Q6ZQT7 251 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 CLEC20AQ6ZU45 233 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 DPPA2Q7Z7J5 298 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 MARCH3Q86UD3 253 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 TCAIMQ8N3R3 496 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 OR6K3Q8NGY3 331 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 ACTL9Q8TC94 416 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 SCGB1C1Q8TD33 95 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 B9D2Q9BPU9 175 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 SHANK2-AS3Q9BTD1 123 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 TXNIPQ9H3M7 391 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 TREM1Q9NP99 234 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 CHMP5Q9NZZ3 219 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 C14orf166Q9Y224 244 aaKnown RBP1.33□□□□□ -2.2
CD47-203ENST00000398258 TRAPPC1Q9Y5R8 145 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 SHROOM3Q8TF72 1996 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 MYO15BQ96JP2 1530 aa1.33□□□□□ -2.2
CD47-203ENST00000398258 NUP153P49790 1475 aaKnown RBP1.32□□□□□ -2.2
CD47-203ENST00000398258 IGHV1-45A0A0A0MS14 117 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 A0A1W2PNN7 141 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 GOLGA8IPA6NC78 632 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 A8MWP4 228 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 LEUTXA8MZ59 168 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 POLR3GO15318 223 aaPredicted RBP1.32□□□□□ -2.2
CD47-203ENST00000398258 RGS5O15539 181 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 SYNGR1O43759 233 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 POP7O75817 140 aaKnown RBP1.32□□□□□ -2.2
CD47-203ENST00000398258 CPSF4O95639 269 aaKnown RBP1.32□□□□□ -2.2
CD47-203ENST00000398258 EPPINO95925 133 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 NPPAP01160 153 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms