RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 CLEC9AQ6UXN8 241 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 YIPF6Q96EC8 236 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 ZNF488Q96MN9 340 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 P2RX4Q99571 388 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 IL11P20809 199 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 GNG4P50150 75 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 GUCA2BQ16661 112 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 ETV3LQ6ZN32 361 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 SLC16A12Q6ZSM3 486 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 DYNC2LI1Q8TCX1 351 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 UCK1Q9HA47 277 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 MMP15P51511 669 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 FGF8P55075 233 aaPredicted RBP9.97□□□□□ -0.81
TTC28-201ENST00000397906 LOXL4Q96JB6 756 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 DUSP21Q9H596 190 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 KNL1Q8NG31 2342 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 CLPPQ16740 277 aaPredicted RBP9.97□□□□□ -0.81
TTC28-201ENST00000397906 CABLES2Q9BTV7 478 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 CFHR5Q9BXR6 569 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 FOXJ2Q9P0K8 574 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 TMEM251Q8N6I4 163 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 OR10A7Q8NGE5 316 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 IGHV3OR16-12A0A075B7B8 117 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 ACP1P24666 158 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 ATP5J2P56134 94 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 TIAL1Q01085 375 aaKnown RBP eCLIP9.97□□□□□ -0.815e-8■■■□□ 15.4
TTC28-201ENST00000397906 TBC1D26Q86UD7 250 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 TPRX1Q8N7U7 411 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 FOXS1O43638 330 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 INO80CQ6PI98 192 aaPredicted RBP9.97□□□□□ -0.81
TTC28-201ENST00000397906 PARP11Q9NR21 331 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 MRM2Q9UI43 246 aaKnown RBP9.97□□□□□ -0.81
TTC28-201ENST00000397906 SCO1O75880 301 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 HOXA4Q00056 320 aaPredicted RBP9.97□□□□□ -0.81
TTC28-201ENST00000397906 MYPOPQ86VE0 399 aaPredicted RBP9.97□□□□□ -0.81
TTC28-201ENST00000397906 ARRDC1Q8N5I2 433 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 OXA1LQ15070 435 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 CADM3Q8N126 398 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 SPICQ8N5J4 248 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 MS4A3Q96HJ5 214 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 FUCA1P04066 466 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 PPP1R1AQ13522 171 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 SAP25Q8TEE9 199 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 FLYWCH2Q96CP2 140 aaKnown RBP9.97□□□□□ -0.81
TTC28-201ENST00000397906 RASL12Q9NYN1 266 aa9.97□□□□□ -0.81
TTC28-201ENST00000397906 PTTG1IPP53801 180 aa9.96□□□□□ -0.81
TTC28-201ENST00000397906 KRTCAP3Q53RY4 240 aa9.96□□□□□ -0.81
TTC28-201ENST00000397906 CCL13Q99616 98 aa9.96□□□□□ -0.81
TTC28-201ENST00000397906 GATCO43716 136 aaKnown RBP9.96□□□□□ -0.81
TTC28-201ENST00000397906 ACAA2P42765 397 aaKnown RBP9.96□□□□□ -0.81
TTC28-201ENST00000397906 RPL31P62899 125 aaKnown RBP9.96□□□□□ -0.81
TTC28-201ENST00000397906 INPP5JQ15735 1006 aaPredicted RBP9.96□□□□□ -0.81
TTC28-201ENST00000397906 IGHV3-72A0A0B4J1Y9 119 aa9.96□□□□□ -0.81
TTC28-201ENST00000397906 KRTDAPP60985 99 aa9.96□□□□□ -0.81
TTC28-201ENST00000397906 PJVKQ0ZLH3 352 aa9.96□□□□□ -0.81
TTC28-201ENST00000397906 HARBI1Q96MB7 349 aa9.96□□□□□ -0.81
TTC28-201ENST00000397906 PLPP2O43688 288 aa9.96□□□□□ -0.81
TTC28-201ENST00000397906 LY6EQ16553 131 aa9.96□□□□□ -0.81
TTC28-201ENST00000397906 PIMREGQ9BSJ6 248 aa9.96□□□□□ -0.81
TTC28-201ENST00000397906 C12orf10Q9HB07 376 aa9.96□□□□□ -0.81
TTC28-201ENST00000397906 PRSS50Q9UI38 385 aa9.96□□□□□ -0.81
TTC28-201ENST00000397906 DEFA6Q01524 100 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 SLC23A3Q6PIS1 610 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 RAB18Q9NP72 206 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 C1RLQ9NZP8 487 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 B4E171 279 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 C1QBP02746 253 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 TSPAN7P41732 249 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 LOXL3P58215 753 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 FAM122BQ7Z309 247 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 ZDHHC11Q9H8X9 412 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 G6PCP35575 357 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 OR4D10Q8NGI6 311 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 EXOGQ9Y2C4 368 aaKnown RBP9.96□□□□□ -0.82
TTC28-201ENST00000397906 LNP1A1A4G5 178 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 TBX19O60806 448 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 GP1BAP07359 652 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 FRRS1LQ9P0K9 344 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 TNS1Q9HBL0 1735 aaKnown RBP9.96□□□□□ -0.82
TTC28-201ENST00000397906 CD200P41217 278 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 OR2V2Q96R30 315 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 SPAG17Q6Q759 2223 aa9.96□□□□□ -0.82
TTC28-201ENST00000397906 TRDCB7Z8K6 153 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 OR8D4Q8NGM9 314 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 G0S2P27469 103 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 ZNF629Q9UEG4 869 aaPredicted RBP9.95□□□□□ -0.82
TTC28-201ENST00000397906 DLEC1Q9Y238 1755 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 FAM24AA6NFZ4 105 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 PMCHP20382 165 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 MIDNQ504T8 468 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 FA2HQ7L5A8 372 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 OR4D11Q8NGI4 311 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 SPNP16150 400 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 BAP18Q8IXM2 172 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 DDA1Q9BW61 102 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 SSBP1Q04837 148 aaKnown RBP9.95□□□□□ -0.82
TTC28-201ENST00000397906 MGPP08493 103 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 FAM87AP0C7U9 286 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 FAM214BQ7L5A3 538 aa9.95□□□□□ -0.82
TTC28-201ENST00000397906 STARD10Q9Y365 291 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms