RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 DNASE2BQ8WZ79 361 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 MRPS18CQ9Y3D5 142 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 MED19A0JLT2 244 aaPredicted RBP13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 SERPINE3A8MV23 424 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 GEMIN2O14893 280 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 TK1P04183 234 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 PTGDSP41222 190 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 TSPAN7P41732 249 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 SP6Q3SY56 376 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 GPR157Q5UAW9 335 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 ABLIM2Q6H8Q1 611 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 OR1P1Q8NH06 330 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 TOMM40LQ969M1 308 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 PLEKHJ1Q9NW61 149 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 V9GYS6 101 aa13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 ASCC3Q8N3C0 2202 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-201ENST00000397901 OR2J2O76002 312 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 RPLP1P05386 114 aaKnown RBP13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 EPHA1P21709 976 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 RND2P52198 227 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 SLC25A45Q8N413 288 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 OXGR1Q96P68 337 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 KIAA1456Q9P272 454 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 SEMA5BQ9P283 1151 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 PIGLQ9Y2B2 252 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 ETV2O00321 342 aaPredicted RBP13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 HSPB1P04792 205 aaKnown RBP13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 TMEM225BP0DP42 221 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 GNG10P50151 68 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 CCL20P78556 96 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 MRPS11P82912 194 aaKnown RBP13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 PLXDC2Q6UX71 529 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 SLC35G3Q8N808 338 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 CDH20Q9HBT6 801 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 TMEM242Q9NWH2 141 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 ZNF581Q9P0T4 197 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 IL17BQ9UHF5 180 aa13.88□□□□□ -0.19
CHMP1A-201ENST00000397901 MSTNO14793 375 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 TIAF1O95411 115 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 GLI4P10075 376 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 RRADP55042 308 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 SLC25A53Q5H9E4 307 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 HLA-CQ95604 372 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 LIME1Q9H400 295 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 CBLN4Q9NTU7 201 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 PADI1Q9ULC6 663 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 CRYM-AS1A6NIL9 109 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 CLDN34H7C241 214 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 XRCC2O43543 280 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 DIRAS3O95661 229 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 CTSDP07339 412 aaPredicted RBP13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 DBHP09172 617 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 OPRM1P35372 400 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 HLA-DRB3P79483 266 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 PRAMEF20Q5VT98 475 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 MRPL52Q86TS9 123 aaKnown RBP13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 CYB561D1Q8N8Q1 229 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 ADPRHL1Q8NDY3 354 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 WSB1Q9Y6I7 421 aa13.87□□□□□ -0.19
CHMP1A-201ENST00000397901 TRBV24-1A0A075B6N3 115 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 ANGPTL7O43827 346 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 DHRS3O75911 302 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 SCAF4O95104 1147 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 GLB1P16278 677 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 PRSS12P56730 875 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 PIGPP57054 158 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 KCNMB1Q16558 191 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 HIST3H3Q16695 136 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 NKAIN1Q4KMZ8 207 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 PHYHD1Q5SRE7 291 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 TSPO2Q5TGU0 170 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 SPSB3Q6PJ21 355 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 OR2M3Q8NG83 312 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 CLDN23Q96B33 292 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 SYT3Q9BQG1 590 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 FAAP24Q9BTP7 215 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 TM2D1Q9BX74 207 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 ASCL3Q9NQ33 180 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 GPR173Q9NS66 373 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 IGHV3-15A0A0B4J1V0 119 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 MBPP02686 304 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 GUCA1AP43080 201 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 ALDH3B1P43353 468 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 PAX5Q02548 391 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 CLN3Q13286 438 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 ICAM4Q14773 271 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 IQCJQ1A5X6 159 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 COA6Q5JTJ3 125 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 OR4X1Q8NH49 305 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 HAS2Q92819 552 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 RIMS4Q9H426 269 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 MYOTQ9UBF9 498 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 VAX2Q9UIW0 290 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 LIPGQ9Y5X9 500 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 ADAMTS20P59510 1910 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 TRIOBPQ9H2D6 2365 aa13.86□□□□□ -0.19
CHMP1A-201ENST00000397901 TMEM210A6NLX4 147 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 K7ESF4 209 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 TP53I11O14683 189 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms