RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ETV3LQ6ZN32 361 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 OR5C1Q8NGR4 320 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 LYPD6BQ8NI32 183 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 BADQ92934 168 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 DEFB126Q9BYW3 111 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 Q9N2K0 584 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 METTL1Q9UBP6 276 aaKnown RBP4.8□□□□□ -1.64
PTPRD-205ENST00000397611 PITPNC1Q9UKF7 332 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 MMP9P14780 707 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 COL9A1P20849 921 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 MFAP5Q13361 173 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 NRN1LQ496H8 165 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 AARDQ4LEZ3 155 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 TCTEX1D1Q8N7M0 179 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 MR1Q95460 341 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 AMELYQ99218 206 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 STRADBQ9C0K7 418 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 PAM16Q9Y3D7 125 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 SCN5AQ14524 2016 aa4.8□□□□□ -1.64
PTPRD-205ENST00000397611 UBE2L5PA0A1B0GUS4 154 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 CLPSP04118 112 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 THBS4P35443 961 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 UCP3P55916 312 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 RPS16P62249 146 aaKnown RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 RIPPLY2Q5TAB7 128 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 SYT13Q7L8C5 426 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 OR5AS1Q8N127 324 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 ADAMTS17Q8TE56 1095 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF721Q8TF20 911 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 PSMF1Q92530 271 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 ACTR3CQ9C0K3 210 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 FAM234AQ9H0X4 552 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 WDR13Q9H1Z4 485 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 SLC26A1Q9H2B4 701 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 OR5AC2Q9NZP5 309 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 C19orf25Q9UFG5 118 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 A0A1B0GW64 132 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 MAP1LC3B2A6NCE7 125 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 OPN1MWP04001 364 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 OPN1MW2P0DN77 364 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 OPN1MW3P0DN78 364 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 RNASEKQ6P5S7 137 aaKnown RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 DMBX1Q8NFW5 382 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 NTNG2Q96CW9 530 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 ARHGAP5-AS1Q96IT6 56 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 TPPP3Q9BW30 176 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 MAP1LC3BQ9GZQ8 125 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 OPN3Q9H1Y3 402 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 DOK5Q9P104 306 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 SDK1Q7Z5N4 2213 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 H3BMH7 237 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 PGA4P0DJD7 388 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 PGA5P0DJD9 388 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 SULT1A2P50226 295 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 LURAP1LQ8IV03 231 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 WFIKKN1Q96NZ8 548 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 TM2D1Q9BX74 207 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 FAM206AQ9NX38 181 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 BET1LQ9NYM9 111 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 KLK13Q9UKR3 277 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 TRAPPC2LQ9UL33 140 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 C2orf72A6NCS6 295 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 LIPT2A6NK58 231 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 WNT2P09544 360 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 CD38P28907 300 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 SMAD4Q13485 552 aaKnown RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 LTC4SQ16873 150 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 PARM1Q6UWI2 310 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 Q6ZS49 121 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 GCNT2Q8N0V5 402 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 MRPL24Q96A35 216 aaKnown RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 EMC6Q9BV81 110 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 GPR84Q9NQS5 396 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 COA4Q9NYJ1 87 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 SPRY1O43609 319 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 LPAR6P43657 344 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 HTR5AP47898 357 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 SPCS3P61009 180 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 PLGLB1Q02325 96 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 HABP2Q14520 560 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 ATP5SQ99766 215 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 NRSN2Q9GZP1 204 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 SNRNP200O75643 2136 aaKnown RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 S100A7P31151 101 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 SRSF3P84103 164 aaKnown RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 C9orf135Q5VTT2 229 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 BMPERQ8N8U9 685 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 VN1R17PQ8TDU5 208 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 NANOS1Q8WY41 292 aaKnown RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 ROBO4Q8WZ75 1007 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 ESRP2Q9H6T0 727 aaKnown RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 KIF26AQ9ULI4 1882 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 DUX1O43812 170 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF737O75373 536 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 HINT1P49773 126 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 COL5A1-AS1Q5SY13 56 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 MKXQ8IYA7 352 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF100Q8IYN0 542 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 PAQR4Q8N4S7 273 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-205ENST00000397611 IL36GQ9NZH8 169 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms