RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 MAFIPQ8WZ33 124 aa17.75■□□□□ 0.43
CPNE1-204ENST00000397443 ZNF701Q9NV72 531 aaPredicted RBP17.75■□□□□ 0.43
CPNE1-204ENST00000397443 RBBP9O75884 186 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 ATXN7L3Q14CW9 347 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-204ENST00000397443 NEU4Q8WWR8 484 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-204ENST00000397443 CMSS1Q9BQ75 279 aaKnown RBP17.74■□□□□ 0.43
CPNE1-204ENST00000397443 SPACA1Q9HBV2 294 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 POLQO75417 2590 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 NBPF19A0A087WUL8 3843 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 FBN2P35556 2912 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 PPIAL4EA0A075B759 164 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 PPIAL4DF5H284 164 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 PSPNO60542 156 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 PPIAL4FP0DN26 164 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 ARL6IP1Q15041 203 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 PNLIPRP3Q17RR3 467 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 POM121Q96HA1 1249 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 ST6GALNAC5Q9BVH7 336 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 IFT46Q9NQC8 304 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 PPIAL4AQ9Y536 164 aa17.74■□□□□ 0.43
CPNE1-204ENST00000397443 ARID1AO14497 2285 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 A0A1B0GW55 424 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 DUX4L2P0CJ85 424 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 DUX4L3P0CJ86 424 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 DUX4L4P0CJ87 422 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 DUX4L5P0CJ88 424 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 DUX4L6P0CJ89 424 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 DUX4L7P0CJ90 424 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 DUX4L9Q6RFH8 374 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-204ENST00000397443 TOMM5Q8N4H5 51 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 CCL13Q99616 98 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 SCPEP1Q9HB40 452 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 CHMP1AQ9HD42 196 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-204ENST00000397443 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.73■□□□□ 0.431e-7■■■■□ 24.8
CPNE1-204ENST00000397443 ETAA1Q9NY74 926 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 DUX4Q9UBX2 424 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 MTFP1Q9UDX5 166 aa17.73■□□□□ 0.43
CPNE1-204ENST00000397443 SELLP14151 372 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 ZNRF1Q8ND25 227 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 OR4S1Q8NGB4 309 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 ANGPTL6Q8NI99 470 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 SETD6Q8TBK2 473 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 MARVELD3Q96A59 401 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 IFT22Q9H7X7 185 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 PALMDQ9NP74 551 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 LGALS8O00214 317 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 SULT1C2O00338 296 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 ZMYND11Q15326 602 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 AVPI1Q5T686 147 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 STUMQ69YW2 141 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 ZNF787Q6DD87 383 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 OR52W1Q6IF63 320 aa17.72■□□□□ 0.43
CPNE1-204ENST00000397443 TRAV38-1A0A0B4J264 116 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 TMEM82A0PJX8 343 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 ISPDA4D126 451 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 OVOL3O00110 214 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 MUC1P15941 1255 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-204ENST00000397443 AMY2BP19961 511 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 HLA-DMAP28067 261 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 RBM39Q14498 530 aaKnown RBP17.71■□□□□ 0.43
CPNE1-204ENST00000397443 TEX36Q5VZQ5 186 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 DNM1P46Q6ZS02 220 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 POC5Q8NA72 575 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 PLPPR1Q8TBJ4 325 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 DLL4Q9NR61 685 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 ZNF222Q9UK12 451 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 TBC1D24Q9ULP9 559 aa17.71■□□□□ 0.43
CPNE1-204ENST00000397443 RBMX2Q9Y388 322 aaKnown RBP17.71■□□□□ 0.43
CPNE1-204ENST00000397443 H3BUI4 141 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 IFNL4K9M1U5 179 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 RP2O75695 350 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 KRTAP10-9P60411 292 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 KIAA2026Q5HYC2 2103 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 FAAP20Q6NZ36 180 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 C17orf107Q6ZR85 190 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 FAM216BQ8N7L0 139 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 C12orf4Q9NQ89 552 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 TMPRSS2O15393 492 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 PPIHO43447 177 aaKnown RBP17.7■□□□□ 0.42
CPNE1-204ENST00000397443 F12P00748 615 aaPredicted RBP17.7■□□□□ 0.42
CPNE1-204ENST00000397443 EFNA4P52798 201 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 ACTBP60709 375 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 BTG1P62324 171 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 ACTG1P63261 375 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 OR4K15Q8NH41 348 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 C14orf79Q96F83 325 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 MAB21L2Q9Y586 359 aa17.7■□□□□ 0.42
CPNE1-204ENST00000397443 TRAV39A0A0B4J263 110 aa17.69■□□□□ 0.42
CPNE1-204ENST00000397443 MEX3AA1L020 520 aaKnown RBP17.69■□□□□ 0.42
CPNE1-204ENST00000397443 LMO1P25800 156 aa17.69■□□□□ 0.42
CPNE1-204ENST00000397443 OR3A1P47881 315 aa17.69■□□□□ 0.42
CPNE1-204ENST00000397443 AESQ08117 197 aa17.69■□□□□ 0.42
CPNE1-204ENST00000397443 EDDM3AQ14507 147 aa17.69■□□□□ 0.42
CPNE1-204ENST00000397443 GRK1Q15835 563 aa17.69■□□□□ 0.42
CPNE1-204ENST00000397443 TPRX1Q8N7U7 411 aa17.69■□□□□ 0.42
CPNE1-204ENST00000397443 TMEM185AQ8NFB2 350 aa17.69■□□□□ 0.42
CPNE1-204ENST00000397443 CCDC107Q8WV48 283 aa17.69■□□□□ 0.42
CPNE1-204ENST00000397443 GAFA1Q96PS6 74 aa17.69■□□□□ 0.42
CPNE1-204ENST00000397443 TMEM165Q9HC07 324 aa17.69■□□□□ 0.42
CPNE1-204ENST00000397443 PLEKHA6Q9Y2H5 1048 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms