RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 METRNQ9UJH8 293 aa23.04■■□□□ 1.28
CPNE1-203ENST00000397442 ZNF222Q9UK12 451 aa23.04■■□□□ 1.28
CPNE1-203ENST00000397442 DSCAMO60469 2012 aa23.04■■□□□ 1.28
CPNE1-203ENST00000397442 IFNL4K9M1U5 179 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 PSPNO60542 156 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 NAT1P18440 290 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 AP3S2P59780 193 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 OXA1LQ15070 435 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 GDPD3Q7L5L3 318 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 OR4S1Q8NGB4 309 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 ANGPTL6Q8NI99 470 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 CHPT1Q8WUD6 406 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 SNAPC3Q92966 411 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 COX4I2Q96KJ9 171 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 ZNF107Q9UII5 783 aaPredicted RBP23.03■■□□□ 1.28
CPNE1-203ENST00000397442 COX6B1P14854 86 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 PRDX2P32119 198 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 CBX5P45973 191 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 PAN3Q58A45 887 aaKnown RBP23.03■■□□□ 1.28
CPNE1-203ENST00000397442 OR52W1Q6IF63 320 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 TMEM229BQ8NBD8 167 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 OCEL1Q9H607 264 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 HRASLSQ9HDD0 168 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 IFT46Q9NQC8 304 aa23.03■■□□□ 1.28
CPNE1-203ENST00000397442 PTTG1O95997 202 aa23.02■■□□□ 1.28
CPNE1-203ENST00000397442 CD3DP04234 171 aa23.02■■□□□ 1.28
CPNE1-203ENST00000397442 AMY2BP19961 511 aa23.02■■□□□ 1.28
CPNE1-203ENST00000397442 BTCP35070 178 aa23.02■■□□□ 1.28
CPNE1-203ENST00000397442 COL10A1Q03692 680 aa23.02■■□□□ 1.28
CPNE1-203ENST00000397442 HOGA1Q86XE5 327 aa23.02■■□□□ 1.28
CPNE1-203ENST00000397442 C12orf4Q9NQ89 552 aa23.02■■□□□ 1.28
CPNE1-203ENST00000397442 USP9YO00507 2555 aaPredicted RBP23.01■■□□□ 1.27
CPNE1-203ENST00000397442 NAPSAO96009 420 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 FCGR3AP08637 254 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 DTYMKP23919 212 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 COL8A2P25067 703 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 RBM39Q14498 530 aaKnown RBP23.01■■□□□ 1.27
CPNE1-203ENST00000397442 MICBQ29980 383 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 SHEQ5VZ18 495 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 STUMQ69YW2 141 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 NRARPQ7Z6K4 114 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 C1orf87Q8N0U7 546 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 OR4D10Q8NGI6 311 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 NEK7Q8TDX7 302 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 IGFBPL1Q8WX77 278 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 MAFIPQ8WZ33 124 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 ST6GALNAC5Q9BVH7 336 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 PPA2Q9H2U2 334 aa23.01■■□□□ 1.27
CPNE1-203ENST00000397442 TMEM82A0PJX8 343 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 OOEPA6NGQ2 149 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 MT-ND4P03905 459 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 MUC1P15941 1255 aaPredicted RBP23■■□□□ 1.27
CPNE1-203ENST00000397442 HLA-DMAP28067 261 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 TAS2R19P59542 299 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 C17orf107Q6ZR85 190 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 CENPSQ8N2Z9 138 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 PLPPR1Q8TBJ4 325 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 C7orf50Q9BRJ6 194 aaKnown RBP23■■□□□ 1.27
CPNE1-203ENST00000397442 ZNF701Q9NV72 531 aaPredicted RBP23■■□□□ 1.27
CPNE1-203ENST00000397442 ETAA1Q9NY74 926 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 IGKV1D-8A0A087WSZ0 117 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 LYNX1G3V0Z9 82 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 ZNF737O75373 536 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 CD74P04233 296 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 LYNX1P0DP58 116 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 SPNP16150 400 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 MRPS15P82914 257 aaKnown RBP23■■□□□ 1.27
CPNE1-203ENST00000397442 FAAP20Q6NZ36 180 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 DEFB108BQ8NET1 73 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 OR4C16Q8NGL9 310 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 NEU4Q8WWR8 484 aaPredicted RBP23■■□□□ 1.27
CPNE1-203ENST00000397442 DEDD2Q8WXF8 326 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 TMEM165Q9HC07 324 aa23■■□□□ 1.27
CPNE1-203ENST00000397442 ZNF736B4DX44 427 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-203ENST00000397442 LGALS8O00214 317 aa22.99■■□□□ 1.27
CPNE1-203ENST00000397442 RP2O75695 350 aa22.99■■□□□ 1.27
CPNE1-203ENST00000397442 CDKN1AP38936 164 aa22.99■■□□□ 1.27
CPNE1-203ENST00000397442 OR3A1P47881 315 aa22.99■■□□□ 1.27
CPNE1-203ENST00000397442 HFEQ30201 348 aa22.99■■□□□ 1.27
CPNE1-203ENST00000397442 STEAP1BQ6NZ63 245 aa22.99■■□□□ 1.27
CPNE1-203ENST00000397442 ZNF295-AS1Q8N0V1 137 aa22.99■■□□□ 1.27
CPNE1-203ENST00000397442 CHST6Q9GZX3 395 aa22.99■■□□□ 1.27
CPNE1-203ENST00000397442 SHARPINQ9H0F6 387 aa22.99■■□□□ 1.27
CPNE1-203ENST00000397442 HELZ2Q9BYK8 2649 aaKnown RBP22.98■■□□□ 1.27
CPNE1-203ENST00000397442 LY6HO94772 140 aa22.98■■□□□ 1.27
CPNE1-203ENST00000397442 AKAIN1P0CW23 69 aa22.98■■□□□ 1.27
CPNE1-203ENST00000397442 GABRA2P47869 451 aa22.98■■□□□ 1.27
CPNE1-203ENST00000397442 TRIM16LQ309B1 348 aa22.98■■□□□ 1.27
CPNE1-203ENST00000397442 MZT2BQ6NZ67 158 aa22.98■■□□□ 1.27
CPNE1-203ENST00000397442 C20orf204Q6ZNR8 217 aa22.98■■□□□ 1.27
CPNE1-203ENST00000397442 GAPTQ8N292 157 aa22.98■■□□□ 1.27
CPNE1-203ENST00000397442 BEST4Q8NFU0 473 aa22.98■■□□□ 1.27
CPNE1-203ENST00000397442 MAB21L2Q9Y586 359 aa22.98■■□□□ 1.27
CPNE1-203ENST00000397442 PPIAL4EA0A075B759 164 aa22.97■■□□□ 1.27
CPNE1-203ENST00000397442 PPIAL4DF5H284 164 aa22.97■■□□□ 1.27
CPNE1-203ENST00000397442 OVOL3O00110 214 aa22.97■■□□□ 1.27
CPNE1-203ENST00000397442 PPIAL4FP0DN26 164 aa22.97■■□□□ 1.27
CPNE1-203ENST00000397442 SLC6A1P30531 599 aa22.97■■□□□ 1.27
CPNE1-203ENST00000397442 ATXN7L3Q14CW9 347 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-203ENST00000397442 MRPL30Q8TCC3 161 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms