RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 FAM90A9PA6NNJ1 464 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 FAM90A12PA8MX19 464 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 FAM90A5PA8MXJ8 464 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 LY6LH3BQJ8 138 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 BUB1B-PAK6H3BSN5 160 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 ATP8B1O43520 1251 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 PRKYO43930 277 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 RAMP3O60896 148 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 SULT1C4O75897 302 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 RPP14O95059 124 aaKnown RBP6.94□□□□□ -1.3
CAPN3-208ENST00000397204 ZFPL1O95159 310 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 FAM107AO95990 144 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 KRT8P05787 483 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 FAM90A15PP0C7V4 464 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 FAM90A13PP0C7W8 464 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 FAM90A14PP0C7W9 464 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 FAM90A24PP0C7X0 464 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 CALB2P22676 271 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 LMO1P25800 156 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 DUSP1P28562 367 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 MYCNOSP40205 109 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 OR3A1P47881 315 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 NPBWR2P48146 333 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 MTCP1P56278 107 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 RPL23AP62750 156 aaKnown RBP6.94□□□□□ -1.3
CAPN3-208ENST00000397204 C9orf152Q5JTZ5 239 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 TPTE2P1Q5T6R2 138 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 AADACL4Q5VUY2 407 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 RNF144BQ7Z419 303 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 CATSPERDQ86XM0 798 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 KRTAP19-1Q8IUB9 90 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 COMMD1Q8N668 190 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 YIPF7Q8N8F6 280 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 OR4D6Q8NGJ1 314 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 BCAS4Q8TDM0 211 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 CHPT1Q8WUD6 406 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 TTTY10Q9BZA0 68 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 CHST5Q9GZS9 411 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 RHOFQ9HBH0 211 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 PCDHB16Q9NRJ7 776 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 KIAA2026Q5HYC2 2103 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 METTL15A6NJ78 407 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 ENTPD6O75354 484 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 OR2T7P0C7T2 308 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 T-ENOLP0DO92 83 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 PRKACAP17612 351 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 PRKACBP22694 351 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 GLIPR1P48060 266 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 DAPP51397 102 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 GYS2P54840 703 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 DGCR2P98153 550 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 PDZK1IP1Q13113 114 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 ODF4Q2M2E3 257 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 HLA-DRB5Q30154 266 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 C4orf46Q504U0 113 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 PRAMEF5Q5TYX0 476 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 FAHD1Q6P587 224 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 BAIAP2L2Q6UXY1 529 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 ETV3LQ6ZN32 361 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 PLEKHG7Q6ZR37 379 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 UTS2BQ765I0 119 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 OR2W3Q7Z3T1 314 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 BCDIN3DQ7Z5W3 292 aaKnown RBP6.93□□□□□ -1.3
CAPN3-208ENST00000397204 ZNF329Q86UD4 541 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 TCEANCQ8N8B7 351 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 TMEM163Q8TC26 289 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 CCDC124Q96CT7 223 aaKnown RBP6.93□□□□□ -1.3
CAPN3-208ENST00000397204 P2RX4Q99571 388 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 ZNF649Q9BS31 505 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 ZNF286AQ9HBT8 521 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 HMG20AQ9NP66 347 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 C19orf73Q9NVV2 129 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 RBFOX1Q9NWB1 397 aaKnown RBP6.93□□□□□ -1.3
CAPN3-208ENST00000397204 IL36RNQ9UBH0 155 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 MOB4Q9Y3A3 225 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 HSPE1-MOB4S4R3N1 261 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 U3KQK5 164 aa6.93□□□□□ -1.3
CAPN3-208ENST00000397204 DSCAML1Q8TD84 2053 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 ODAMA1E959 279 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 SH2D7A6NKC9 451 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-208ENST00000397204 ZNF729A6NN14 1252 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-208ENST00000397204 H0YHG0 523 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 C3orf84H3BNL1 204 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 RGS13O14921 159 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 FGF16O43320 207 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 OR2H2O95918 312 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 CSN2P05814 226 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 UBCP0CG48 685 aaKnown RBP6.92□□□□□ -1.3
CAPN3-208ENST00000397204 BCL3P20749 454 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 PTGFRP43088 359 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 OR3A4PP47883 348 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 SLC35B1P78383 322 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 AESQ08117 197 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 TMEM244Q5VVB8 128 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 LHFPL2Q6ZUX7 228 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 GID4Q8IVV7 300 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 ZNF565Q8N9K5 539 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 CHST4Q8NCG5 386 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 OR9G1Q8NH87 305 aa6.92□□□□□ -1.3
CAPN3-208ENST00000397204 THTPAQ9BU02 230 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms