RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 TRAV38-1A0A0B4J264 116 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 TRAV21A0A0B4J279 112 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 DLX6P56179 175 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 MMDQ15546 238 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 RAB40CQ96S21 281 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 Q9N2K0 584 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 MRPS16Q9Y3D3 137 aaKnown RBP10.96□□□□□ -0.66
SMU1-201ENST00000397149 CCL27Q9Y4X3 112 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 ISLRO14498 428 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 RER1O15258 196 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 FMODQ06828 376 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 AQP6Q13520 282 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 KISS1Q15726 138 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 SMOC1Q9H4F8 434 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 TMEM38AQ9H6F2 299 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 SAP30LQ9HAJ7 183 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 HMX2A2RU54 273 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 C7orf71A4D174 169 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 MDKP21741 143 aaPredicted RBP10.96□□□□□ -0.66
SMU1-201ENST00000397149 LRRC75BQ2VPJ9 315 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 Q5PR19 223 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 CLEC18BQ6UXF7 455 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 Q8IYB0 196 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 DUX5Q96PT3 197 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 WNT5BQ9H1J7 359 aa10.96□□□□□ -0.66
SMU1-201ENST00000397149 C19orf53Q9UNZ5 99 aaPredicted RBP10.96□□□□□ -0.66
SMU1-201ENST00000397149 OR4C45A6NMZ5 311 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 VDAC1P21796 283 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 PTGFRP43088 359 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 CMPK2Q5EBM0 449 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 OR1K1Q8NGR3 316 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 B9D1Q9UPM9 204 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 SNRPGP15A8MWD9 76 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 PPICP45877 212 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 HLA-DRB3P79483 266 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 CACNA1CQ13936 2221 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 PABPC1L2AQ5JQF8 200 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 TMEM211Q6ICI0 200 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 OR4S2Q8NH73 311 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 MAFAQ8NHW3 353 aaPredicted RBP10.95□□□□□ -0.66
SMU1-201ENST00000397149 C20orf27Q9GZN8 174 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 FAM219AQ8IW50 185 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 TMEM229BQ8NBD8 167 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 GUCD1Q96NT3 240 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 THAP10Q9P2Z0 257 aaPredicted RBP10.95□□□□□ -0.66
SMU1-201ENST00000397149 ZDHHC8Q9ULC8 765 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 A0A1B0GV72 72 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 Q6ZSR9 355 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 OR2A5Q96R48 311 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 ACER3Q9NUN7 267 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 BCL9LQ86UU0 1499 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 IGKV3D-20A0A0C4DH25 116 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 ZNF56Q15929 161 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 METRNLQ641Q3 311 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 PDLIM5Q96HC4 596 aaKnown RBP10.95□□□□□ -0.66
SMU1-201ENST00000397149 MMP25Q9NPA2 562 aa10.95□□□□□ -0.66
SMU1-201ENST00000397149 NUBP1P53384 320 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 SOX8P57073 446 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 LY6EQ16553 131 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 A0A1B0GU03 582 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 TMEM189A5PLL7 270 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 TMEM189-UBE2V1I3L0A0 370 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 PAGE4O60829 102 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 ABLIM3O94929 683 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 CKS2P33552 79 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 CDK5R1Q15078 307 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 PYCR3Q53H96 274 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 KLHDC9Q8NEP7 349 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 NEU1Q99519 415 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 EID2BQ96D98 161 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 HARBI1Q96MB7 349 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 CXXC4Q9H2H0 198 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 GPR35Q9HC97 309 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 PRSS50Q9UI38 385 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 TRAV12-3A0A0B4J271 114 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 PGA3P0DJD8 388 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 HIST1H1BP16401 226 aaKnown RBP10.94□□□□□ -0.66
SMU1-201ENST00000397149 TMEM255AQ5JRV8 349 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 TMEM78Q5T7P6 136 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 HDGFL3Q9Y3E1 203 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 PHLDA3Q9Y5J5 127 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 IGHV3-72A0A0B4J1Y9 119 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 LINC01553A4QN01 128 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 KBTBD11O94819 623 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 IL4P05112 153 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 ZNF32P17041 273 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 ARF6P62330 175 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 TMEM129A0AVI4 362 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 FPR2P25090 351 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 DUSP8Q13202 625 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 ASAH1Q13510 395 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 PNLIPRP3Q17RR3 467 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 BHLHA15Q7RTS1 189 aaPredicted RBP10.94□□□□□ -0.66
SMU1-201ENST00000397149 FAM169BQ8N8A8 192 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 OR1P1Q8NH06 330 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 MAP6Q96JE9 813 aa10.94□□□□□ -0.66
SMU1-201ENST00000397149 RBFOX3A6NFN3 312 aa10.93□□□□□ -0.66
SMU1-201ENST00000397149 CDS2O95674 445 aa10.93□□□□□ -0.66
SMU1-201ENST00000397149 CLDN20P56880 219 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms