RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 PFDN1O60925 122 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 IL7P13232 177 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 ELK1P19419 428 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 MPZP25189 248 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 OR10A3P58181 314 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 ARF6P62330 175 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 IL18Q14116 193 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 PYDC2Q56P42 97 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 ACP7Q6ZNF0 438 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 UTS2BQ765I0 119 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 CMTM4Q8IZR5 234 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 OR13C3Q8NGS6 347 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 C8orf46Q8TAG6 207 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 ADAT3Q96EY9 351 aaPredicted RBP12.02□□□□□ -0.48
SEC13-208ENST00000397109 DCTN5Q9BTE1 182 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 PKIBQ9C010 78 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 SIRPDQ9H106 197 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 SLC25A10Q9UBX3 287 aaPredicted RBP12.02□□□□□ -0.48
SEC13-208ENST00000397109 DHDHQ9UQ10 334 aa12.02□□□□□ -0.48
SEC13-208ENST00000397109 AK6Q9Y3D8 172 aaKnown RBP12.02□□□□□ -0.48
SEC13-208ENST00000397109 IGKV1D-17A0A075B6S4 117 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 FAM230AA0A1W2PPH8 454 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 SMIM30A4D0T7 59 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 H3BSH0 61 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 CTDSPLO15194 276 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 SYNGR1O43759 233 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 ALX3O95076 343 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 NXPH2O95156 264 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 SFTPBP07988 381 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 SLC2A2P11168 524 aaPredicted RBP12.02□□□□□ -0.49
SEC13-208ENST00000397109 ATF1P18846 271 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 UBA52P62987 128 aaKnown RBP12.02□□□□□ -0.49
SEC13-208ENST00000397109 ACTG1P63261 375 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 IL24Q13007 206 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 ASAH1Q13510 395 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 CNN3Q15417 329 aaKnown RBP12.02□□□□□ -0.49
SEC13-208ENST00000397109 UBE2V2Q15819 145 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 UBE2NLQ5JXB2 153 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 ZNF529Q6P280 563 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 LRRTM1Q86UE6 522 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 Q8N402 240 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 KIR3DL3Q8N743 410 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 SAMD12Q8N8I0 201 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 TSEN15Q8WW01 171 aaKnown RBP12.02□□□□□ -0.49
SEC13-208ENST00000397109 H1FXQ92522 213 aaKnown RBP12.02□□□□□ -0.49
SEC13-208ENST00000397109 FOXRED1Q96CU9 486 aaPredicted RBP12.02□□□□□ -0.49
SEC13-208ENST00000397109 SDSLQ96GA7 329 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 TBX15Q96SF7 602 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 ESM1Q9NQ30 184 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 EXTL2Q9UBQ6 330 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 ZNF222Q9UK12 451 aa12.02□□□□□ -0.49
SEC13-208ENST00000397109 A0A1W2PPK0 400 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 RFPL4AA6NLU0 287 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 RFPL4AL1F8VTS6 287 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 SULT1B1O43704 296 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 ZNF20P17024 532 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 NDUFB7P17568 137 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 PRKACBP22694 351 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 PRTN3P24158 256 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 BAMBIQ13145 260 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 BAK1Q16611 211 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 ANGPTL5Q86XS5 388 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 SERPINA12Q8IW75 414 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 FGFRL1Q8N441 504 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 DNAAF1Q8NEP3 725 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 FGGYQ96C11 551 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 BORCS8Q96FH0 119 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 ZNF48Q96MX3 618 aaPredicted RBP12.01□□□□□ -0.49
SEC13-208ENST00000397109 NRIP2Q9BQI9 281 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 ABCG5Q9H222 651 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 ONECUT1Q9UBC0 465 aa12.01□□□□□ -0.49
SEC13-208ENST00000397109 CENPVL3A0A0U1RRI6 287 aa12□□□□□ -0.49
SEC13-208ENST00000397109 FUOMA2VDF0 154 aa12□□□□□ -0.49
SEC13-208ENST00000397109 SELLP14151 372 aa12□□□□□ -0.49
SEC13-208ENST00000397109 IGFBP3P17936 291 aaPredicted RBP12□□□□□ -0.49
SEC13-208ENST00000397109 PRDX2P32119 198 aa12□□□□□ -0.49
SEC13-208ENST00000397109 MNDAP41218 407 aa12□□□□□ -0.49
SEC13-208ENST00000397109 ATP1B3P54709 279 aa12□□□□□ -0.49
SEC13-208ENST00000397109 TRIQKQ629K1 86 aa12□□□□□ -0.49
SEC13-208ENST00000397109 GLT8D1Q68CQ7 371 aa12□□□□□ -0.49
SEC13-208ENST00000397109 ASPHD2Q6ICH7 369 aa12□□□□□ -0.49
SEC13-208ENST00000397109 BRD3OSQ6XYD6 125 aa12□□□□□ -0.49
SEC13-208ENST00000397109 C1orf122Q6ZSJ8 110 aa12□□□□□ -0.49
SEC13-208ENST00000397109 CALHM1Q8IU99 346 aa12□□□□□ -0.49
SEC13-208ENST00000397109 SNX29P2Q8IUI4 249 aa12□□□□□ -0.49
SEC13-208ENST00000397109 ZNF561Q8N587 486 aa12□□□□□ -0.49
SEC13-208ENST00000397109 NKAIN3Q8N8D7 197 aa12□□□□□ -0.49
SEC13-208ENST00000397109 ZNRF1Q8ND25 227 aa12□□□□□ -0.49
SEC13-208ENST00000397109 TMEM185AQ8NFB2 350 aa12□□□□□ -0.49
SEC13-208ENST00000397109 NPRL2Q8WTW4 380 aa12□□□□□ -0.49
SEC13-208ENST00000397109 GCDHQ92947 438 aaPredicted RBP12□□□□□ -0.49
SEC13-208ENST00000397109 ZNF488Q96MN9 340 aa12□□□□□ -0.49
SEC13-208ENST00000397109 NEK6Q9HC98 313 aa12□□□□□ -0.49
SEC13-208ENST00000397109 HES4Q9HCC6 221 aa12□□□□□ -0.49
SEC13-208ENST00000397109 MAB21L2Q9Y586 359 aa12□□□□□ -0.49
SEC13-208ENST00000397109 TRBV23-1A0A0A0MS06 115 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 IGHV1-69DA0A0B4J2H0 117 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 TMEM89A2RUT3 159 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 DNAJC9-AS1A6NH13 148 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 CLDN34H7C241 214 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms