RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 F2RL2O00254 374 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 MGST3O14880 152 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 ACAA2P42765 397 aaKnown RBP13.74□□□□□ -0.21
GNE-202ENST00000396594 CDC34P49427 236 aaPredicted RBP13.74□□□□□ -0.21
GNE-202ENST00000396594 Q3ZCU0 254 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 FFAR4Q5NUL3 377 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 HOGA1Q86XE5 327 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 RGS13O14921 159 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 MPDU1O75352 247 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 CCL3P10147 92 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 ACP1P24666 158 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 CALHM1Q8IU99 346 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 R3HDM4Q96D70 268 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 SEMA7AO75326 666 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 LYZL6O75951 148 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 TMEM45BQ96B21 275 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 RNF122Q9H9V4 155 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 CBR1P16152 277 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 CTSSP25774 331 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 RPS27P42677 84 aaKnown RBP13.74□□□□□ -0.21
GNE-202ENST00000396594 NDUFA6P56556 154 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 ZNF345Q14585 488 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 MOGAT2Q3SYC2 334 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 VAX1Q5SQQ9 334 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 SLC7A5P1Q8MH63 180 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 TMPRSS5Q9H3S3 457 aa13.74□□□□□ -0.21
GNE-202ENST00000396594 MPC2O95563 127 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 LIMK1P53667 647 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 SLC24A4Q8NFF2 622 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 J3QR89 54 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 SYNGR2O43760 224 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 FTH1P19P0C7X4 201 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 CCL4P13236 92 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 OR3A1P47881 315 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 CEACAM21Q3KPI0 293 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 SPINK14Q6IE38 97 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 FAAP24Q9BTP7 215 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 Q9N2K0 584 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 COL4A5P29400 1685 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 DCTN6O00399 190 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 MYF5P13349 255 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 HAGHQ16775 308 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 SLC16A12Q6ZSM3 486 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 TMEM104Q8NE00 496 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 LOC390937A0A1W2PQ73 354 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 SP9P0CG40 484 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 YBX1P67809 324 aaKnown RBP13.73□□□□□ -0.21
GNE-202ENST00000396594 OR2B11Q5JQS5 317 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 HSD17B13Q7Z5P4 300 aaPredicted RBP13.73□□□□□ -0.21
GNE-202ENST00000396594 TGIF2LYQ8IUE0 185 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 TGIF2LXQ8IUE1 241 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 OR1L8Q8NGR8 309 aa13.73□□□□□ -0.21
GNE-202ENST00000396594 PLEKHB1Q9UF11 243 aaPredicted RBP13.73□□□□□ -0.21
GNE-202ENST00000396594 FAM221AA4D161 298 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 CLDN34H7C241 214 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 TLE1Q04724 770 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 PPP1R1AQ13522 171 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 CSRP2Q16527 193 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 LYRM7Q5U5X0 104 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 ACY3Q96HD9 319 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 TPPP3Q9BW30 176 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 DSPPQ9NZW4 1301 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 SBF2Q86WG5 1849 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 PPIAL4EA0A075B759 164 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 OR2T8A6NH00 312 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 PPIAL4DF5H284 164 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 PPIAL4FP0DN26 164 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 GUK1Q16774 197 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 TMEM241Q24JQ0 296 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 DPF1Q92782 380 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 SLC35B3Q9H1N7 401 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 PPIAL4AQ9Y536 164 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 TDRD15B5MCY1 1934 aaKnown RBP13.72□□□□□ -0.21
GNE-202ENST00000396594 MAP1LC3B2A6NCE7 125 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 S100A4P26447 101 aaKnown RBP13.72□□□□□ -0.21
GNE-202ENST00000396594 FAM3AP98173 230 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 PAX5Q02548 391 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 MAP1LC3BQ9GZQ8 125 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 SLC2A9Q9NRM0 540 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 FRRS1LQ9P0K9 344 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 SF3B6Q9Y3B4 125 aaKnown RBP13.72□□□□□ -0.21
GNE-202ENST00000396594 MMP24Q9Y5R2 645 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 FAM90A26D6RGX4 464 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 PMELP40967 661 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 ANKRD34AQ69YU3 496 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 FAM216AQ8WUB2 273 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 TMEM190Q8WZ59 177 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 CACNG5Q9UF02 275 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 FLVCR2Q9UPI3 526 aa13.72□□□□□ -0.21
GNE-202ENST00000396594 SHISA8B8ZZ34 492 aa13.71□□□□□ -0.21
GNE-202ENST00000396594 ID1P41134 155 aa13.71□□□□□ -0.21
GNE-202ENST00000396594 DHRS7BQ6IAN0 325 aaPredicted RBP13.71□□□□□ -0.21
GNE-202ENST00000396594 FDX2Q6P4F2 183 aa13.71□□□□□ -0.21
GNE-202ENST00000396594 SLC25A47Q6Q0C1 308 aa13.71□□□□□ -0.21
GNE-202ENST00000396594 UBAC2Q8NBM4 344 aa13.71□□□□□ -0.21
GNE-202ENST00000396594 C1orf162Q8NEQ5 155 aaPredicted RBP13.71□□□□□ -0.21
GNE-202ENST00000396594 CCL17Q92583 94 aa13.71□□□□□ -0.21
GNE-202ENST00000396594 FAM122AQ96E09 287 aa13.71□□□□□ -0.21
GNE-202ENST00000396594 PDE6DO43924 150 aa13.71□□□□□ -0.21
GNE-202ENST00000396594 HIST1H1EP10412 219 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms