RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 DUSP1P28562 367 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 RPL12P30050 165 aaKnown RBP14.17□□□□□ -0.14
TRIM39-205ENST00000396551 NOVA1P51513 510 aaKnown RBP14.17□□□□□ -0.14
TRIM39-205ENST00000396551 CLN3Q13286 438 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 MST1LQ2TV78 715 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 VASH2Q86V25 355 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 OR5T2Q8NGG2 359 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 PLSCR2Q9NRY7 297 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 AMDHD2Q9Y303 409 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 TRAPPC2LH3BP13 241 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 H7C1Q1 480 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 HERV-K104P61576 105 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 TSC22D1Q15714 1073 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 MKXQ8IYA7 352 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 RAB19A4D1S5 217 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 HSPB6O14558 160 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 SCTP09683 121 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 CTRB1P17538 263 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 CTRB2Q6GPI1 263 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 HAGHLQ6PII5 290 aaPredicted RBP14.17□□□□□ -0.14
TRIM39-205ENST00000396551 MYPOPQ86VE0 399 aaPredicted RBP14.17□□□□□ -0.14
TRIM39-205ENST00000396551 TP53RKQ96S44 253 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 OPA3Q9H6K4 179 aa14.17□□□□□ -0.14
TRIM39-205ENST00000396551 K7EPK0 472 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 HERPUD1Q15011 391 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 FAM71E2Q8N5Q1 922 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 GP6Q9HCN6 339 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 ARHGDIBP52566 201 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 MPV17LQ2QL34 196 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 PIP4P1Q86T03 277 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 HIST1H2AAQ96QV6 131 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 SYT3Q9BQG1 590 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 AIFM2Q9BRQ8 373 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 DCAF16Q9NXF7 216 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 FBXL17Q9UF56 701 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 GLS2Q9UI32 602 aa14.16□□□□□ -0.14
TRIM39-205ENST00000396551 TAAR5O14804 337 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 PHF1O43189 567 aaPredicted RBP14.15□□□□□ -0.14
TRIM39-205ENST00000396551 ATF4P18848 351 aaPredicted RBP14.15□□□□□ -0.14
TRIM39-205ENST00000396551 SOX8P57073 446 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 SMCO1Q147U7 214 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 SPATA46Q5T0L3 261 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 OR2T2Q6IF00 324 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 OR52M1Q8NGK5 317 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 ZC4H2Q9NQZ6 224 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 PLA2G2EQ9NZK7 142 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 LHX6Q9UPM6 363 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 DIRAS3O95661 229 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 GNRHRP30968 328 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 KCNJ3P48549 501 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 TNFSF10P50591 281 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 AKR1C2P52895 323 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 SRSF3P84103 164 aaKnown RBP14.15□□□□□ -0.14
TRIM39-205ENST00000396551 AKR1C1Q04828 323 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 SRSF7Q16629 238 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRIM39-205ENST00000396551 TMEM268Q5VZI3 342 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 UQCC3Q6UW78 93 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 CCDC36Q8IYA8 594 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 TMEM178AQ8NBL3 297 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 BSCL2Q96G97 398 aaPredicted RBP14.15□□□□□ -0.14
TRIM39-205ENST00000396551 TAF9BQ9HBM6 251 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 ANKRD30BLA7E2S9 258 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 PRSS44E7EML9 344 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 NKX2-8O15522 239 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 WISP2O76076 250 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 ZNF600Q6ZNG1 722 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 LGI3Q8N145 548 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 CCDC71LQ8N9Z2 235 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 OR4A4PQ8NGN8 299 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 ERGIC1Q969X5 290 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 FAM86C1Q9NVL1 165 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 LPAR3Q9UBY5 353 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 MPC1Q9Y5U8 109 aa14.15□□□□□ -0.14
TRIM39-205ENST00000396551 IGKV1-6A0A0C4DH72 117 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 BET1O15155 118 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 CELA3BP08861 270 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 TMEM33P57088 247 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 CLEC9AQ6UXN8 241 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 C17orf78Q8N4C9 275 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 SUMF1Q8NBK3 374 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 LRRC46Q96FV0 321 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 NARS2Q96I59 477 aaKnown RBP14.14□□□□□ -0.15
TRIM39-205ENST00000396551 ZDHHC8Q9ULC8 765 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 ZNF705EA8MWA4 302 aaPredicted RBP14.14□□□□□ -0.15
TRIM39-205ENST00000396551 CDRT15L2A8MXV6 281 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 MPPED1O15442 326 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 CA6P23280 308 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 ZNF273Q14593 569 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 DPPA2Q7Z7J5 298 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 LDLRAD3Q86YD5 345 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 SUMF2Q8NBJ7 301 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 SMIM3Q9BZL3 60 aa14.14□□□□□ -0.15
TRIM39-205ENST00000396551 IGKV1D-13A0A0B4J2D9 117 aa14.13□□□□□ -0.15
TRIM39-205ENST00000396551 ATP6V1G2-DDX39BF2Z307 99 aa14.13□□□□□ -0.15
TRIM39-205ENST00000396551 TSPAN4O14817 238 aa14.13□□□□□ -0.15
TRIM39-205ENST00000396551 IGKV1-13P0DP09 117 aa14.13□□□□□ -0.15
TRIM39-205ENST00000396551 C20orf204Q6ZNR8 217 aa14.13□□□□□ -0.15
TRIM39-205ENST00000396551 SLC35G3Q8N808 338 aa14.13□□□□□ -0.15
TRIM39-205ENST00000396551 NEK7Q8TDX7 302 aa14.13□□□□□ -0.15
TRIM39-205ENST00000396551 NANOS1Q8WY41 292 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms