RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TATDN3Q17R31 274 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 ZNF782Q6ZMW2 699 aaPredicted RBP10.68□□□□□ -0.7
TRIM39-204ENST00000396548 LHFPL1Q86WI0 220 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 ZCCHC24Q8N2G6 241 aaKnown RBP10.68□□□□□ -0.7
TRIM39-204ENST00000396548 CD177Q8N6Q3 437 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 NEURL2Q9BR09 285 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 ANXA10Q9UJ72 324 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 ZNF221Q9UK13 617 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 NBASA2RRP1 2371 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 DYSFO75923 2080 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 IGKV1D-17A0A075B6S4 117 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 A0A1W2PPR1 153 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 C7orf66A4D0T2 115 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 CEACAM18A8MTB9 384 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 IFNL4K9M1U5 179 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 M0R233 179 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 HS3ST1O14792 307 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 SH2D1BO14796 132 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 CEBPDP49716 269 aaPredicted RBP10.67□□□□□ -0.7
TRIM39-204ENST00000396548 RBMS2Q15434 407 aaKnown RBP10.67□□□□□ -0.7
TRIM39-204ENST00000396548 FAM209AQ5JX71 171 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 ZNF660Q6AZW8 331 aaPredicted RBP10.67□□□□□ -0.7
TRIM39-204ENST00000396548 ZNF497Q6ZNH5 498 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 Q9N2K0 584 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 ZNF222Q9UK12 451 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 DIDO1Q9BTC0 2240 aaKnown RBP10.67□□□□□ -0.7
TRIM39-204ENST00000396548 TRAV6A0A075B6T7 132 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 FAM221AA4D161 298 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 POM121CA8CG34 1229 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 VSTM5A8MXK1 200 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 MCRIP1C9JLW8 97 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 PSPNO60542 156 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 AMY2AP04746 511 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 H2AFB2P0C5Z0 115 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 PAX5Q02548 391 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 ZMYND11Q15326 602 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 TESK1Q15569 626 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 RNASE10Q5GAN6 216 aaKnown RBP10.67□□□□□ -0.7
TRIM39-204ENST00000396548 AGAP6Q5VW22 663 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 C11orf71Q6IPW1 123 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 PLPPR1Q8TBJ4 325 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 GHITMQ9H3K2 345 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 ALG5Q9Y673 324 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 FLNCQ14315 2725 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 TFF1P04155 84 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 PSG2P11465 335 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 TNFSF4P23510 183 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 SRSF1Q07955 248 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRIM39-204ENST00000396548 SMIM21Q3B7S5 101 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 C17orf107Q6ZR85 190 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 SLC36A1Q7Z2H8 476 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 SHARPINQ9H0F6 387 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 METRNQ9UJH8 293 aa10.67□□□□□ -0.7
TRIM39-204ENST00000396548 OR2AT4A6NND4 320 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 PYCARD-AS1I3L0S3 204 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 ATP6V1G1O75348 118 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 AMY2BP19961 511 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 TAS2R46P59540 309 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 GMFBP60983 142 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 AADACL3Q5VUY0 350 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 TEX36Q5VZQ5 186 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 IDO2Q6ZQW0 420 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 RDH5Q92781 318 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 LIME1Q9H400 295 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 ZNF701Q9NV72 531 aaPredicted RBP10.66□□□□□ -0.7
TRIM39-204ENST00000396548 NPTNQ9Y639 398 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 ANKHD1Q8IWZ3 2542 aaKnown RBP10.66□□□□□ -0.7
TRIM39-204ENST00000396548 TMEM82A0PJX8 343 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 DISC1C4P0D8 188 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 SIRPB1O00241 398 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 CD8AP01732 235 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 MDH2P40926 338 aaKnown RBP10.66□□□□□ -0.7
TRIM39-204ENST00000396548 CCL8P80075 99 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 RSBN1Q5VWQ0 802 aaPredicted RBP10.66□□□□□ -0.7
TRIM39-204ENST00000396548 ARRDC1Q8N5I2 433 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 PRRT1Q99946 306 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 DECR2Q9NUI1 292 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 RNF7Q9UBF6 113 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 WIPI2Q9Y4P8 454 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 ARFGEF3Q5TH69 2177 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 EPG5Q9HCE0 2579 aa10.66□□□□□ -0.7
TRIM39-204ENST00000396548 A0A0A6YYJ9 748 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 hCG_1807616A0A1W2PRN6 198 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 RFPL4AA6NLU0 287 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 RFPL4AL1F8VTS6 287 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 HSPB6O14558 160 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 ZNF737O75373 536 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 OR3A1P47881 315 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 RBM39Q14498 530 aaKnown RBP10.65□□□□□ -0.7
TRIM39-204ENST00000396548 CDK10Q15131 360 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 DHRS11Q6UWP2 260 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 MUC15Q8N387 334 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 SLC25A21Q9BQT8 299 aaPredicted RBP10.65□□□□□ -0.7
TRIM39-204ENST00000396548 GINS4Q9BRT9 223 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 RIMS4Q9H426 269 aaPredicted RBP10.65□□□□□ -0.7
TRIM39-204ENST00000396548 ARPC1BO15143 372 aaKnown RBP10.65□□□□□ -0.7
TRIM39-204ENST00000396548 PEX14O75381 377 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 ZNF44P15621 663 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 FIP1L1Q6UN15 594 aaKnown RBP10.65□□□□□ -0.7
TRIM39-204ENST00000396548 OR5H2Q8NGV7 314 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms