RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 RCVRNP35243 200 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 OR1E2P47887 323 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 GZMMP51124 257 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 RAB5BP61020 215 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 LAMTOR4Q0VGL1 99 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 KIAA0087Q14695 138 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 NDUFA5Q16718 116 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 LRRC36Q1X8D7 754 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 ACOT6Q3I5F7 207 aaPredicted RBP3.81□□□□□ -1.8
GABPB1-204ENST00000396464 KDM4DQ6B0I6 523 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 SLC35E4Q6ICL7 350 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 FAM53AQ6NSI3 398 aaPredicted RBP3.81□□□□□ -1.8
GABPB1-204ENST00000396464 NEGR1Q7Z3B1 354 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 NAA40Q86UY6 237 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 CALHM3Q86XJ0 350 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 CATSPER3Q86XQ3 398 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 MFSD8Q8NHS3 518 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 HAUS1Q96CS2 278 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 TCEAL4Q96EI5 215 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 OR2M4Q96R27 311 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 OR52B2Q96RD2 323 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 CMSS1Q9BQ75 279 aaKnown RBP3.81□□□□□ -1.8
GABPB1-204ENST00000396464 PANK3Q9H999 370 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 ISG20L2Q9H9L3 353 aaKnown RBP3.81□□□□□ -1.8
GABPB1-204ENST00000396464 ZNF226Q9NYT6 803 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 DOK5Q9P104 306 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 ZNF223Q9UK11 482 aaPredicted RBP3.81□□□□□ -1.8
GABPB1-204ENST00000396464 UTP11Q9Y3A2 253 aaKnown RBP3.81□□□□□ -1.8
GABPB1-204ENST00000396464 SLC25A15Q9Y619 301 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 ANKRD50Q9ULJ7 1429 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 UNC13BO14795 1591 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 ARHGEF10O15013 1369 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 RIMS1Q86UR5 1692 aaKnown RBP3.81□□□□□ -1.8
GABPB1-204ENST00000396464 ADGRL2O95490 1459 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 MAGI2Q86UL8 1455 aa3.81□□□□□ -1.8
GABPB1-204ENST00000396464 MYH15Q9Y2K3 1946 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 TRAV9-2A0A087WT02 112 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 TRAV8-2A0A0B4J237 113 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 IGHV3-16A0A0C4DH30 117 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 HFM1A2PYH4 1435 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 I3L4J1 428 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 DHRS3O75911 302 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 EPPINO95925 133 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 CXCL2P19875 107 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 LMO2P25791 158 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 MIPP30301 263 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 KRTAP27-1Q3LI81 207 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 ZNF585BQ52M93 769 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 C9orf57Q5W0N0 161 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 IGFL2Q6UWQ7 119 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 CLEC19AQ6UXS0 136 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 TEX43Q6ZNM6 134 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 LINC00173Q6ZV60 143 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 NOTCH2NLQ7Z3S9 236 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 ZCCHC24Q8N2G6 241 aaKnown RBP3.8□□□□□ -1.8
GABPB1-204ENST00000396464 SLC35F6Q8N357 371 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 MUC15Q8N387 334 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 NATD1Q8N6N6 113 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 OR11H7Q8NGC8 314 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 OR1N2Q8NGR9 330 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 OR10A6Q8NH74 314 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 GEMIN6Q8WXD5 167 aaKnown RBP3.8□□□□□ -1.8
GABPB1-204ENST00000396464 ZNF524Q96C55 264 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 DCPSQ96C86 337 aaKnown RBP3.8□□□□□ -1.8
GABPB1-204ENST00000396464 TM4SF18Q96CE8 201 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 FMC1Q96HJ9 113 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 FCRL1Q96LA6 429 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 QKIQ96PU8 341 aaKnown RBP eCLIP3.8□□□□□ -1.83e-6■■■■□ 21.4
GABPB1-204ENST00000396464 TBX5Q99593 518 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 TMEM204Q9BSN7 226 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 CHST5Q9GZS9 411 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 GNB4Q9HAV0 340 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 EDA2RQ9HAV5 297 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 RBFOX1Q9NWB1 397 aaKnown RBP3.8□□□□□ -1.8
GABPB1-204ENST00000396464 YEATS2Q9ULM3 1422 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 SIGLEC7Q9Y286 467 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 SLC35A3Q9Y2D2 325 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 CARHSP1Q9Y2V2 147 aaKnown RBP3.8□□□□□ -1.8
GABPB1-204ENST00000396464 KDM5DQ9BY66 1539 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 FAM135AQ9P2D6 1515 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 IQGAP3Q86VI3 1631 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 MBD5Q9P267 1494 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 MLH3Q9UHC1 1453 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 TMEM131Q92545 1883 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 SPHKAPQ2M3C7 1700 aa3.8□□□□□ -1.8
GABPB1-204ENST00000396464 RTEL1-TNFRSF6BF6WH68 1400 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 NAIPQ13075 1403 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 IGLV4-3A0A075B6K6 122 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 MPTX1A8MV57 137 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 C8orf87E5RJ46 101 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 MANBAO00462 879 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 NDUFS5O43920 106 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 STK16O75716 305 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 ARL6IP5O75915 188 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 CRYGDP07320 174 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 TFPTP0C1Z6 253 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 FAM228BP0C875 321 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 CYBAP13498 195 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 CD1EP15812 388 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 GZMHP20718 246 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms