RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 POM121Q96HA1 1249 aa13.81□□□□□ -0.2
CCHCR1-202ENST00000396263 SHANK1Q9Y566 2161 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 hCG_1809904A0A1W2PP81 198 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 A0A1W2PR64 198 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 A0A1W2PRV1 198 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 CYTIPO60759 359 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 FBXO24O75426 580 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 SCGB1D2O95969 90 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 MMP7P09237 267 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 FXYD4P59646 89 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 WIPI1Q5MNZ9 446 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 PLCXD3Q63HM9 321 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 TMEM211Q6ICI0 200 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 BRICD5Q6PL45 260 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 GTF3AQ92664 365 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 MSI2Q96DH6 328 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 SYT3Q9BQG1 590 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 AGPAT2O15120 278 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 ZNF205O95201 554 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 OTX2P32243 289 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 RBM11P57052 281 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 RPS18P62269 152 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 DEFA6Q01524 100 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 MALLQ13021 153 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 NRN1LQ496H8 165 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 LYZL2Q7Z4W2 148 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 TCTEX1D2Q8WW35 142 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 ERGIC1Q969X5 290 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 CPNE4Q96A23 557 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 RHOVQ96L33 236 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 C1QTNF5Q9BXJ0 243 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 PRDM14Q9GZV8 571 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 TCFL5Q9UL49 500 aa13.8□□□□□ -0.2
CCHCR1-202ENST00000396263 A0A1W2PPH5 198 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 TRAPPC6AO75865 159 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 EDN3P14138 238 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 Q6ZRG5 221 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 PIGCQ92535 297 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 TMEM45BQ96B21 275 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 RPS10P5Q9NQ39 176 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 DEPPQ9NTK1 212 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 TREM2Q9NZC2 230 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 STARD10Q9Y365 291 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 FAM221AA4D161 298 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 FAM157AC9JC47 383 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 MT-ND4LP03901 98 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 DVL1P1P54792 670 aaPredicted RBP13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 GFRA1P56159 465 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 PHLDA2Q53GA4 152 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 KRBOX4Q5JUW0 171 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 TSPO2Q5TGU0 170 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 GPR157Q5UAW9 335 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 Q6ZPA2 131 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 LGI3Q8N145 548 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 SLC39A7Q92504 469 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 SMIM3Q9BZL3 60 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 CACFD1Q9UGQ2 172 aa13.79□□□□□ -0.2
CCHCR1-202ENST00000396263 GPR137BO60478 399 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 FUT3P21217 361 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 DUSP1P28562 367 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 GLP1RP43220 463 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 OR2B8PP59922 312 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 DAZAP2Q15038 168 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 SUMF1Q8NBK3 374 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 NAXEQ8NCW5 288 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 Q8NFD4 153 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 ABHD3Q8WU67 409 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 TMPRSS5Q9H3S3 457 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 FAM212BQ9NTI7 297 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 ZNF587BE7ETH6 402 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 SEC11BP0C7V7 166 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 DAOP14920 347 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 CD80P33681 288 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 IL13RA2Q14627 380 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 COLCA1Q6ZS62 124 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 CALHM1Q8IU99 346 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 CCDC71LQ8N9Z2 235 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 OR5L1Q8NGL2 311 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 AKR1E2Q96JD6 320 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 PARPBPQ9NWS1 579 aa13.78□□□□□ -0.2
CCHCR1-202ENST00000396263 AP4M1O00189 453 aa13.77□□□□□ -0.21
CCHCR1-202ENST00000396263 GDF1P27539 372 aa13.77□□□□□ -0.21
CCHCR1-202ENST00000396263 P2RY1P47900 373 aa13.77□□□□□ -0.21
CCHCR1-202ENST00000396263 PYY3Q5JQD4 70 aa13.77□□□□□ -0.21
CCHCR1-202ENST00000396263 DCAF12Q5T6F0 453 aa13.77□□□□□ -0.21
CCHCR1-202ENST00000396263 ZNF611Q8N823 705 aa13.77□□□□□ -0.21
CCHCR1-202ENST00000396263 ZNF845Q96IR2 970 aaPredicted RBP13.77□□□□□ -0.21
CCHCR1-202ENST00000396263 IP6K3Q96PC2 410 aa13.77□□□□□ -0.21
CCHCR1-202ENST00000396263 GINS3Q9BRX5 216 aa13.77□□□□□ -0.21
CCHCR1-202ENST00000396263 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
CCHCR1-202ENST00000396263 TMED3Q9Y3Q3 217 aa13.77□□□□□ -0.21
CCHCR1-202ENST00000396263 OTOGLQ3ZCN5 2332 aa13.77□□□□□ -0.21
CCHCR1-202ENST00000396263 FAM90A10PA6NDY2 464 aa13.76□□□□□ -0.21
CCHCR1-202ENST00000396263 FAM90A18PA6NE21 464 aa13.76□□□□□ -0.21
CCHCR1-202ENST00000396263 FAM90A16PA6NEW6 464 aa13.76□□□□□ -0.21
CCHCR1-202ENST00000396263 FAM90A20PA6NIJ5 464 aa13.76□□□□□ -0.21
CCHCR1-202ENST00000396263 FAM90A8PA6NJQ4 464 aa13.76□□□□□ -0.21
CCHCR1-202ENST00000396263 FAM90A7PA6NKC0 464 aa13.76□□□□□ -0.21
CCHCR1-202ENST00000396263 FAM90A22PA8MWA6 464 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms