RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 NPY4RP50391 375 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 SCGB2A2Q13296 93 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 OPCMLQ14982 345 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 MEX3BQ6ZN04 569 aaKnown RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 SHISA5Q8N114 240 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM190Q8WZ59 177 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 RBPMSQ93062 196 aaKnown RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 COMMD5Q9GZQ3 224 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 CXXC4Q9H2H0 198 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 PPIL3Q9H2H8 161 aaKnown RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 NCR1O76036 304 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 S100PP25815 95 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 LGALS4P56470 323 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 EDDM3BP56851 147 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF79Q15937 498 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF680Q8NEM1 530 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 NUDCD2Q8WVJ2 157 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 MARS2Q96GW9 593 aaKnown RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 H3BMH7 237 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 LHX2P50458 406 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 CCR6P51684 374 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 MADCAM1Q13477 382 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 DGAT2L6Q6ZPD8 337 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 GCNT2Q8N0V5 402 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 C2orf50Q96LR7 162 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 WFDC6Q9BQY6 131 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 BANF2Q9H503 90 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 HECTD1Q9ULT8 2610 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 A0A0A6YYJ9 748 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 MUC1P15941 1255 aaPredicted RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 NQO2P16083 231 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 FCN2Q15485 313 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 ATP6V1FQ16864 119 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 C11orf87Q6NUJ2 197 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 OR8G5Q8NG78 346 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 AKR7LQ8NHP1 331 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 SCARB1Q8WTV0 552 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 SMOC1Q9H4F8 434 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 PLSCR2Q9NRY7 297 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 SPAARA0A1B0GVQ0 90 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 HS3ST1O14792 307 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 ANXA7P20073 488 aaKnown RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 HCCSP53701 268 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 FYTTD1Q96QD9 318 aaKnown RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 TM2D1Q9BX74 207 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 EIF5A2Q9GZV4 153 aaKnown RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 WSB1Q9Y6I7 421 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 TRGV8A0A0C4DH27 118 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 TEX51A0A1B0GUA7 166 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 A0A1W2PN81 502 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM8BA6NDV4 472 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF705EA8MWA4 302 aaPredicted RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 SS18L1O75177 396 aaPredicted RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 NGFP01138 241 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 MST1P26927 711 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 CHRNA7P36544 502 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 HTR2BP41595 481 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 OR2B8PP59922 312 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 TESK1Q15569 626 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 ETFDHQ16134 617 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 ELP2Q6IA86 826 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 TIMP4Q99727 224 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 TXNDC17Q9BRA2 123 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 FAM234AQ9H0X4 552 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 Q9N2K0 584 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 E9PQ18 207 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 RBM11P57052 281 aaKnown RBP2.94□□□□□ -1.94
VPS13C-203ENST00000395896 ATXN7L3Q14CW9 347 aaPredicted RBP2.94□□□□□ -1.94
VPS13C-203ENST00000395896 SFRP5Q5T4F7 317 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 OR1K1Q8NGR3 316 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 FBXW5Q969U6 566 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM56Q96MV1 263 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 STRAPQ9Y3F4 350 aaKnown RBP2.94□□□□□ -1.94
VPS13C-203ENST00000395896 E9PLN8 166 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 BOLA2-SMG1P6H3BVE0 249 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 TSPAN4O14817 238 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 IFNA17P01571 189 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 CD3EP07766 207 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 HOXB5P09067 269 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 SULT1A3P0DMM9 295 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 SULT1A4P0DMN0 295 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 KITLGP21583 273 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 ERHP84090 104 aaKnown RBP2.94□□□□□ -1.94
VPS13C-203ENST00000395896 NHLRC3Q5JS37 347 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 C9orf135Q5VTT2 229 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 RNF138Q8WVD3 245 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 VKORC1Q9BQB6 163 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 SHARPINQ9H0F6 387 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 C1RLQ9NZP8 487 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 LOC101059948A0A1B0GTJ6 334 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 A0A1B0GU03 582 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 A6NIN4 97 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 TM4SF5O14894 197 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 GRPP07492 148 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 RRASP10301 218 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 FOXC1Q12948 553 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 KLF9Q13886 244 aaPredicted RBP2.94□□□□□ -1.94
VPS13C-203ENST00000395896 C3orf36Q3SXR2 165 aa2.94□□□□□ -1.94
VPS13C-203ENST00000395896 FAM74A1Q5RGS3 127 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms