RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 RCN3Q96D15 328 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 SFRP2Q96HF1 295 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 FAM19A4Q96LR4 140 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 OLFM3Q96PB7 478 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 GPR22Q99680 433 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 NXF2Q9GZY0 626 aaKnown RBP3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 ALX4Q9H161 411 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 GLTPQ9NZD2 209 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 OR51B2Q9Y5P1 312 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 NUP155O75694 1391 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 PALLDQ8WX93 1383 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 SETBP1Q9Y6X0 1596 aa3.21□□□□□ -1.89
HMGB1P10-201ENST00000395823 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 ZNF233A6NK53 670 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR11H12B2RN74 326 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 SYNGR1O43759 233 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 RAD1O60671 282 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 UGT2B11O75310 529 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 GCM2O75603 506 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 TYMSP04818 313 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 IFI30P13284 250 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 IGFBP3P17936 291 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 ARL2P36404 184 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 HCCSP53701 268 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 DLX6P56179 175 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 AP1S2P56377 157 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 TAS2R31P59538 309 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 ARG2P78540 354 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 CD164Q04900 197 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 IRF4Q15306 451 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 TSNQ15631 228 aaKnown RBP3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 TRIP13Q15645 432 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 HIST3H3Q16695 136 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 CLEC12BQ2HXU8 276 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 DEFB115Q30KQ5 88 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 KLHL12Q53G59 568 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR10J3Q5JRS4 329 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 CST9Q5W186 159 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR2T5Q6IEZ7 315 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 DHFR2Q86XF0 187 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 RAB43Q86YS6 212 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 ZNF561Q8N587 486 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR11H1Q8NG94 326 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR2T29Q8NH02 315 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR11H2Q8NH07 326 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 TM4SF18Q96CE8 201 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 ADTRPQ96IZ2 230 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 VAT1Q99536 393 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 TIMM17AQ99595 171 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 PDCD1LG2Q9BQ51 273 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 TMEM208Q9BTX3 173 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 TMEM109Q9BVC6 243 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 CDCA4Q9BXL8 241 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 PLA2G2FQ9BZM2 168 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 TPK1Q9H3S4 243 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 ACOT13Q9NPJ3 140 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 RRAGDQ9NQL2 400 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 COMMD9Q9P000 198 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 VPS29Q9UBQ0 182 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 HHLA2Q9UM44 414 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 NDRG2Q9UN36 371 aaKnown RBP3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 NDUFAF1Q9Y375 327 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 KLF12Q9Y4X4 402 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR51B4Q9Y5P0 310 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 PTPRMP28827 1452 aa3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 ZNF646O15015 1829 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P10-201ENST00000395823 DCAF1Q9Y4B6 1507 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 ARHGAP21Q5T5U3 1957 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 IGHV1-69DA0A0B4J2H0 117 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 IGHV5-10-1A0A0J9YXX1 117 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 F5H5T6 163 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 TMX2-CTNND1H3BSU7 103 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 J3QLI3 93 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 BHLHE40O14503 412 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 CDIPTO14735 213 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 UBDO15205 165 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 CHP2O43745 196 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 CRYZL1O95825 349 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 CD74P04233 296 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 CRHP06850 196 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 IGHV1-8P0DP01 117 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 ALOX5APP20292 161 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 GGT2P36268 569 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 RPL5P46777 297 aaKnown RBP3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 GFERP55789 205 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 ESRRGP62508 458 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 EDDM3AQ14507 147 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 RBMY1FQ15415 496 aaKnown RBP3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 SLC25A35Q3KQZ1 300 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 TFDP3Q5H9I0 405 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 HIST2H3PS2Q5TEC6 136 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 TMEM42Q69YG0 159 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 NTM-AS1Q6ZSK4 140 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 Q6ZT83 130 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 TMEM144Q7Z5S9 345 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 S100A7AQ86SG5 101 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 CPNE9Q8IYJ1 553 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 DAW1Q8N136 415 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 NATD1Q8N6N6 113 aa3.2□□□□□ -1.9
HMGB1P10-201ENST00000395823 TMEM161BQ8NDZ6 487 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms