RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 RBPMS2Q6ZRY4 209 aaKnown RBP9.14□□□□□ -0.95
COL4A6-203ENST00000394872 MUC20Q8N307 709 aaPredicted RBP9.14□□□□□ -0.95
COL4A6-203ENST00000394872 OR1L1Q8NH94 360 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 UFC1Q9Y3C8 167 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 TRAV20A0A0B4J274 112 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 ST3GAL2Q16842 350 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 MOGAT2Q3SYC2 334 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 TMEM97Q5BJF2 176 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 CLEC9AQ6UXN8 241 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 OR4D10Q8NGI6 311 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 OR10G4Q8NGN3 311 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 OR10G9Q8NGN4 311 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 OR10G7Q8NGN6 311 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 PCGF1Q9BSM1 259 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 NAT8BQ9UHF3 227 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 MRPS18BQ9Y676 258 aaKnown RBP9.14□□□□□ -0.95
COL4A6-203ENST00000394872 ZNF638Q14966 1978 aaKnown RBP9.14□□□□□ -0.95
COL4A6-203ENST00000394872 NEURL1O76050 574 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 MDP1Q86V88 176 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 PDPNQ86YL7 162 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 TGIF2LYQ8IUE0 185 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 CLN8Q9UBY8 286 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 A0A1W2PQF6 199 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 GATCO43716 136 aaKnown RBP9.14□□□□□ -0.95
COL4A6-203ENST00000394872 HTR1DP28221 377 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 RPS4XP62701 263 aaKnown RBP9.14□□□□□ -0.95
COL4A6-203ENST00000394872 TEX261Q6UWH6 196 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 CES1P1Q9UKY3 287 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 U3KQ87 197 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 TCRBV16S1A1N1A0A5B0 115 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 J3QR89 54 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 PRF1P14222 555 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 GZMKP49863 264 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 TIAL1Q01085 375 aaKnown RBP eCLIP9.14□□□□□ -0.95
COL4A6-203ENST00000394872 ATP6V1FQ16864 119 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 FBXW9Q5XUX1 488 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 MRM1Q6IN84 353 aaKnown RBP9.14□□□□□ -0.95
COL4A6-203ENST00000394872 C9orf40Q8IXQ3 194 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 OR10A7Q8NGE5 316 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 OR8D4Q8NGM9 314 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 TMEM38BQ9NVV0 291 aa9.14□□□□□ -0.95
COL4A6-203ENST00000394872 PCDHGA9Q9Y5G4 932 aaKnown RBP9.14□□□□□ -0.95
COL4A6-203ENST00000394872 SCO1O75880 301 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 ARG1P05089 322 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 FABP4P15090 132 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 TMEM241Q24JQ0 296 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 C10orf35Q96D05 121 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 MS4A7Q9GZW8 240 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-203ENST00000394872 MYO7AQ13402 2215 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 IGHV4-34P06331 123 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 LSM11P83369 360 aaKnown RBP eCLIP9.13□□□□□ -0.95
COL4A6-203ENST00000394872 HOXA4Q00056 320 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-203ENST00000394872 SPICQ8N5J4 248 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 OR2C3Q8N628 320 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 OR10AC1Q8NH08 325 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 PRSS3P2Q8NHM4 247 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 ASCL3Q9NQ33 180 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 SLC52A3Q9NQ40 469 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 DCAF16Q9NXF7 216 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 A0A1W2PPV9 198 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 TMEM210A6NLX4 147 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 B4E171 279 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 APELAP0DMC3 54 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 USF1P22415 310 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-203ENST00000394872 TSPAN7P41732 249 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 FGF8P55075 233 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-203ENST00000394872 NAAAQ02083 359 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 ECSCRQ19T08 205 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 UQCC3Q6UW78 93 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 RNF2Q99496 336 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 SCN1AP35498 2009 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 TRBV23-1A0A0A0MS06 115 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 TEX50A0A1B0GTY4 177 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 DYNLT3P51808 116 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 HMGA2P52926 109 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 NHLH1Q02575 133 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 NHLH2Q02577 135 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 TUSC1Q2TAM9 212 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 WFDC3Q8IUB2 231 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 SP7Q8TDD2 431 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-203ENST00000394872 MSL2Q9HCI7 577 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 UBE2L3P68036 154 aaKnown RBP9.13□□□□□ -0.95
COL4A6-203ENST00000394872 CLEC2AQ6UVW9 174 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 NTN1O95631 604 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 GZMHP20718 246 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 GPR6P46095 362 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-203ENST00000394872 C21orf58P58505 322 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 SSX1Q16384 188 aa9.13□□□□□ -0.95
COL4A6-203ENST00000394872 MED19A0JLT2 244 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-203ENST00000394872 PEBP1P30086 187 aaKnown RBP9.12□□□□□ -0.95
COL4A6-203ENST00000394872 SPCS3P61009 180 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 RANP62826 216 aaKnown RBP9.12□□□□□ -0.95
COL4A6-203ENST00000394872 RPL30P62888 115 aaKnown RBP9.12□□□□□ -0.95
COL4A6-203ENST00000394872 SPRED2Q7Z698 418 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 FLYWCH2Q96CP2 140 aaKnown RBP9.12□□□□□ -0.95
COL4A6-203ENST00000394872 FRRS1LQ9P0K9 344 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 SLC25A10Q9UBX3 287 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-203ENST00000394872 WSB1Q9Y6I7 421 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 LTBP4Q8N2S1 1624 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 DGAT2L7PQ6IED9 249 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms