RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 A0A1B0GV50 99 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 PDCD6O75340 191 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 ARG1P05089 322 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 S100A8P05109 93 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 HTR5AP47898 357 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 SULT1A1P50225 295 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 SSR4P51571 173 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 NUBP1P53384 320 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 HERV-K104P61576 105 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 IL11RAQ14626 422 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 CCDC71LQ8N9Z2 235 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 FAM213BQ8TBF2 198 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 SLC39A7Q92504 469 aa15.83■□□□□ 0.13
PCDHA1-202ENST00000394633 hCG_38984A0A1B0GV85 526 aa15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 B4GALT1P15291 398 aa15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF14P17017 642 aaPredicted RBP15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 MALLQ13021 153 aa15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 DAZAP2Q15038 168 aaPredicted RBP15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 FAM24BQ8N5W8 94 aa15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 CD300LFQ8TDQ1 290 aa15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 ALKBH3Q96Q83 286 aaPredicted RBP15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 PBDC1Q9BVG4 233 aa15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 SF3B5Q9BWJ5 86 aaKnown RBP15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF700Q9H0M5 742 aa15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 SEBOXQ9HB31 216 aaPredicted RBP15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 KCNJ16Q9NPI9 418 aa15.83■□□□□ 0.12
PCDHA1-202ENST00000394633 CFAP47Q6ZTR5 3102 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 CNTRLQ7Z7A1 2325 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 A0A1W2PPE2 198 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 NKX2-6A6NCS4 301 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 OR13C7P0DN81 318 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 TCN2P20062 427 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 RBM11P57052 281 aaKnown RBP15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 PSG4Q00888 419 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF92Q03936 586 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 FABP9Q0Z7S8 132 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 RHEBQ15382 184 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF100Q8IYN0 542 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 LRFN3Q9BTN0 628 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 METTL1Q9UBP6 276 aaKnown RBP15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 PTRH2Q9Y3E5 179 aaKnown RBP15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 C3orf85A0A1B0GTC6 90 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 FAM24AA6NFZ4 105 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 PPYP01298 95 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 FUT6P51993 359 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 B3GALT5-AS1P59052 145 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 GNMTQ14749 295 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 OR1J1Q8NGS3 322 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 FGFBP3Q8TAT2 258 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 RARRES2Q99969 163 aa15.82■□□□□ 0.12
PCDHA1-202ENST00000394633 A0A1B0GW64 132 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 IGSF23A1L1A6 192 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 MPPED1O15442 326 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 IGHV2-5P01817 119 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 RAC3P60763 192 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 OR8B8Q15620 311 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 EXT1Q16394 746 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 IGSF11Q5DX21 431 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF468Q5VIY5 522 aaPredicted RBP15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 PLCXD3Q63HM9 321 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 TMEM211Q6ICI0 200 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 BATF2Q8N1L9 274 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 OR2C3Q8N628 320 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 LFNGQ8NES3 379 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 CPT1CQ8TCG5 803 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 PIGCQ92535 297 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 WNT5BQ9H1J7 359 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF442Q9H7R0 627 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 P4HTMQ9NXG6 502 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 SLC7A11Q9UPY5 501 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 HS3ST3B1Q9Y662 390 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 ZFHX4Q86UP3 3567 aa15.81■□□□□ 0.12
PCDHA1-202ENST00000394633 A0A1W2PNU3 283 aaPredicted RBP15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 TRDCB7Z8K6 153 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 CBR3O75828 277 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 CLINT1Q14677 625 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 CALHM1Q8IU99 346 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 LOC400499M0QZD8 3231 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF716A6NP11 495 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 S100A9P06702 114 aaKnown RBP15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 CCL20P78556 96 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 DHRS13Q6UX07 377 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 YRDCQ86U90 279 aaKnown RBP15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 M1APQ8TC57 530 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 MALSU1Q96EH3 234 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 ABHD14AQ9BUJ0 271 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 OR2H1Q9GZK4 316 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 LOXL2Q9Y4K0 774 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 CEP250Q9BV73 2442 aa15.8■□□□□ 0.12
PCDHA1-202ENST00000394633 GJE1A6NN92 205 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 LINC00587B1AMM8 73 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 GPR37O15354 613 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 KLF7O75840 302 aaPredicted RBP15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 CDS2O95674 445 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 FUT3P21217 361 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 ATP6V0CP27449 155 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 NPBWR2P48146 333 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 POLR2GP62487 172 aaKnown RBP eCLIP15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 ADAM5Q6NVV9 412 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 AAED1Q7RTV5 226 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 579.3 ms