RNA–Protein interactions for RNA: ENST00000393405.6

SNX11-202, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX11, Length 2,733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-202ENST00000393405 PIGLQ9Y2B2 252 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 V9GYS6 101 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 LOC102723996A0A087X1L8 192 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 IGHV1-45A0A0A0MS14 117 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 A0A0U1RQV5 110 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 H3BQ15 152 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 OR5AC1P0C628 307 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 ZNF728P0DKX0 622 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 NUBP1P53384 320 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 NUTF2P61970 127 aaKnown RBP13.24□□□□□ -0.29
SNX11-202ENST00000393405 HLA-BQ31612 363 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 SNAI3Q3KNW1 292 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 C6orf201Q7Z4U5 140 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 HAS2Q92819 552 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 NECAP2Q9NVZ3 263 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 PLEKHJ1Q9NW61 149 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 KIAA1456Q9P272 454 aa13.24□□□□□ -0.29
SNX11-202ENST00000393405 NPIPA2E9PIF3 369 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 NPIPA3F8WFD2 350 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 M0R135 149 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 DHHO43323 396 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 XRCC2O43543 280 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 ZIC3O60481 467 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 DIRAS3O95661 229 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 FKBP2P26885 142 aaKnown RBP13.23□□□□□ -0.29
SNX11-202ENST00000393405 OTX1P32242 354 aaPredicted RBP13.23□□□□□ -0.29
SNX11-202ENST00000393405 PRSS12P56730 875 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 ZNF266Q14584 549 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 ELOBQ15370 118 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 ABCA11PQ4W5N1 156 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 FBXW12Q6X9E4 464 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 RTN4IP1Q8WWV3 396 aaPredicted RBP13.23□□□□□ -0.29
SNX11-202ENST00000393405 RAB39BQ96DA2 213 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 ZNF799Q96GE5 643 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 Q96M66 194 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 HDHD3Q9BSH5 251 aaPredicted RBP13.23□□□□□ -0.29
SNX11-202ENST00000393405 PLEK2Q9NYT0 353 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 LIFP15018 202 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 DTYMKP23919 212 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 IL2RGP31785 369 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 NKX6-1P78426 367 aaPredicted RBP13.23□□□□□ -0.29
SNX11-202ENST00000393405 C4orf17Q53FE4 359 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 OR2T2Q6IF00 324 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 Q6ZSR3 168 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 LYZL2Q7Z4W2 148 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 LGI3Q8N145 548 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 C10orf35Q96D05 121 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 IMMP1LQ96LU5 166 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 PTRH2Q9Y3E5 179 aaKnown RBP13.23□□□□□ -0.29
SNX11-202ENST00000393405 SHANK1Q9Y566 2161 aa13.23□□□□□ -0.29
SNX11-202ENST00000393405 NCKAP5O14513 1909 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 ZNF724A8MTY0 619 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 TMEM225BP0DP42 221 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 COX6A1P12074 109 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 HIST1H3AP68431 136 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 NHLH2Q02577 135 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 HIST2H3PS2Q5TEC6 136 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 FOXL2NBQ6ZUU3 175 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 ZIC4Q8N9L1 334 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 OR2AE1Q8NHA4 323 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 HSF4Q9ULV5 492 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 RCL1Q9Y2P8 373 aaKnown RBP13.22□□□□□ -0.29
SNX11-202ENST00000393405 A0A087WZY1 265 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 A0A0J9YW62 118 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 HSD17B6O14756 317 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 TNFSF11O14788 317 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 ATXN7O15265 892 aaPredicted RBP13.22□□□□□ -0.29
SNX11-202ENST00000393405 CYB5BO43169 146 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 SRP19P09132 144 aaKnown RBP13.22□□□□□ -0.29
SNX11-202ENST00000393405 FGF5P12034 268 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 PAX1P15863 534 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 GABRR1P24046 479 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 TAGLN2P37802 199 aaKnown RBP13.22□□□□□ -0.29
SNX11-202ENST00000393405 SPSB3Q6PJ21 355 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 C5orf24Q7Z6I8 188 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 MSI2Q96DH6 328 aaKnown RBP13.22□□□□□ -0.29
SNX11-202ENST00000393405 BOD1Q96IK1 185 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 PACRGQ96M98 296 aaPredicted RBP13.22□□□□□ -0.29
SNX11-202ENST00000393405 ANGPTL4Q9BY76 406 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 LIME1Q9H400 295 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 WDR54Q9H977 334 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 ZNF581Q9P0T4 197 aa13.22□□□□□ -0.29
SNX11-202ENST00000393405 FOXD3Q9UJU5 478 aaPredicted RBP13.22□□□□□ -0.29
SNX11-202ENST00000393405 MSTNO14793 375 aa13.21□□□□□ -0.29
SNX11-202ENST00000393405 KLF7O75840 302 aaPredicted RBP13.21□□□□□ -0.29
SNX11-202ENST00000393405 HOXA6P31267 233 aa13.21□□□□□ -0.29
SNX11-202ENST00000393405 UBE2KP61086 200 aa13.21□□□□□ -0.29
SNX11-202ENST00000393405 EWSR1Q01844 656 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNX11-202ENST00000393405 GNMTQ14749 295 aa13.21□□□□□ -0.29
SNX11-202ENST00000393405 SP5Q6BEB4 398 aaPredicted RBP13.21□□□□□ -0.29
SNX11-202ENST00000393405 OR4D5Q8NGN0 318 aa13.21□□□□□ -0.29
SNX11-202ENST00000393405 IFI44Q8TCB0 444 aa13.21□□□□□ -0.29
SNX11-202ENST00000393405 SRXN1Q9BYN0 137 aa13.21□□□□□ -0.29
SNX11-202ENST00000393405 ULBP2Q9BZM5 246 aa13.21□□□□□ -0.29
SNX11-202ENST00000393405 GPR173Q9NS66 373 aa13.21□□□□□ -0.29
SNX11-202ENST00000393405 WDFY4Q6ZS81 3184 aa13.21□□□□□ -0.29
SNX11-202ENST00000393405 SOX15O60248 233 aa13.21□□□□□ -0.29
SNX11-202ENST00000393405 PITX3O75364 302 aa13.21□□□□□ -0.29
SNX11-202ENST00000393405 HSPB1P04792 205 aaKnown RBP13.21□□□□□ -0.29
SNX11-202ENST00000393405 TRGC1P0CF51 173 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms