RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 A0A1B0GW15 77 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 AHRRA9YTQ3 701 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 ATXN7O15265 892 aaPredicted RBP6.73□□□□□ -1.33
VTI1A-201ENST00000393077 ONECUT2O95948 504 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 ESDP10768 282 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 THBS3P49746 956 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 RPS18P62269 152 aaKnown RBP6.73□□□□□ -1.33
VTI1A-201ENST00000393077 EWSR1Q01844 656 aaKnown RBP eCLIP6.73□□□□□ -1.33
VTI1A-201ENST00000393077 TMEM176BQ3YBM2 270 aaPredicted RBP6.73□□□□□ -1.33
VTI1A-201ENST00000393077 C9orf50Q5SZB4 431 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 KLHDC8AQ8IYD2 350 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 AGBL5Q8NDL9 886 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 SGMS2Q8NHU3 365 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 RPS4Y2Q8TD47 263 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 OR6C1Q96RD1 312 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 GABRG3Q99928 467 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 SDF2L1Q9HCN8 221 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 HS3ST2Q9Y278 367 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 MRPS28Q9Y2Q9 187 aaKnown RBP6.73□□□□□ -1.33
VTI1A-201ENST00000393077 A0A1B0GWA3 101 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 METTL12A8MUP2 240 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 PLPP1O14494 284 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 RHBDL1O75783 438 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 CD1AP06126 327 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF93P35789 620 aaPredicted RBP6.72□□□□□ -1.33
VTI1A-201ENST00000393077 CLDN18P56856 261 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 DCAF7P61962 342 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 HBG1P69891 147 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 HBG2P69892 147 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 CSRP2Q16527 193 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 LTC4SQ16873 150 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 HNRNPA1L2Q32P51 320 aaKnown RBP6.72□□□□□ -1.33
VTI1A-201ENST00000393077 TMEM144Q7Z5S9 345 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 SPRED2Q7Z698 418 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 RHBDD1Q8TEB9 315 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 FLRT3Q9NZU0 649 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 FRRS1LQ9P0K9 344 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 CLCF1Q9UBD9 225 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 NXT1Q9UKK6 140 aaKnown RBP6.72□□□□□ -1.33
VTI1A-201ENST00000393077 OR51B2Q9Y5P1 312 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 PARP14Q460N5 1801 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 ATG2BQ96BY7 2078 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 A0A1W2PQU0 124 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 A6NDN8 102 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 B4DGG1 531 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 ISLRO14498 428 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 AADACP22760 399 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 RUNX1Q01196 453 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 RBPJQ06330 500 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 RAET1LQ5VY80 246 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 ASTLQ6HA08 431 aaPredicted RBP6.72□□□□□ -1.33
VTI1A-201ENST00000393077 DHRS13Q6UX07 377 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 HOGA1Q86XE5 327 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 FAM89BQ8N5H3 189 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 DEFB119Q8N690 84 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 SLC16A11Q8NCK7 471 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 NOXO1Q8NFA2 376 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 IMMP2LQ96T52 175 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 GPR132Q9UNW8 380 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF835Q9Y2P0 537 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 EMC9Q9Y3B6 208 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 OR51B4Q9Y5P0 310 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 SELENOKQ9Y6D0 94 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 RLFQ13129 1914 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 HMGB3O15347 200 aaKnown RBP6.72□□□□□ -1.33
VTI1A-201ENST00000393077 HCRTR1O43613 425 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 MPLP40238 635 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 CSNK1G2P78368 415 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 SRPXP78539 464 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 FOXK1P85037 733 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 AESQ08117 197 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 ICAM4Q14773 271 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 CST6Q15828 149 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 GLIPR1L1Q6UWM5 242 aa6.72□□□□□ -1.33
VTI1A-201ENST00000393077 CASP8AP2Q9UKL3 1982 aa6.71□□□□□ -1.33
VTI1A-201ENST00000393077 IGHV1-69-2A0A0G2JMI3 117 aa6.71□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF816-ZNF321PA0A0X1KG74 233 aa6.71□□□□□ -1.33
VTI1A-201ENST00000393077 A0A1W2PPV4 95 aa6.71□□□□□ -1.33
VTI1A-201ENST00000393077 BLACEA4D250 179 aa6.71□□□□□ -1.33
VTI1A-201ENST00000393077 GYPAP02724 150 aa6.71□□□□□ -1.33
VTI1A-201ENST00000393077 FOXL2P58012 376 aa6.71□□□□□ -1.33
VTI1A-201ENST00000393077 RPS11P62280 158 aaKnown RBP eCLIP6.71□□□□□ -1.33
VTI1A-201ENST00000393077 LMLNQ96KR4 655 aa6.71□□□□□ -1.33
VTI1A-201ENST00000393077 AURKAIP1Q9NWT8 199 aaPredicted RBP6.71□□□□□ -1.33
VTI1A-201ENST00000393077 H3BNC9 293 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 H3BP45 60 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 RAD51DO75771 328 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 MPZL1O95297 269 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 ABHD16AO95870 558 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 ZGLP1P0C6A0 271 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 NPPBP16860 134 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 ARR3P36575 388 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 MLF2Q15773 248 aaPredicted RBP6.71□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF542PQ5EBM4 170 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 WDR38Q5JTN6 314 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 LRRC25Q8N386 305 aaPredicted RBP6.71□□□□□ -1.34
VTI1A-201ENST00000393077 PNKDQ8N490 385 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 C4orf45Q96LM5 186 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 KCNE3Q9Y6H6 103 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 OR5B21A6NL26 309 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms