RNA–Protein interactions for RNA: ENST00000392004.7

COL6A3-205, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best) BASIC

Gene COL6A3, Length 4,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-205ENST00000392004 OR2V2Q96R30 315 aa8.9□□□□□ -0.99
COL6A3-205ENST00000392004 RNF122Q9H9V4 155 aa8.9□□□□□ -0.99
COL6A3-205ENST00000392004 A0A1W2PP11 408 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 ZNF724A8MTY0 619 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 M0QYG6 137 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 ATG12O94817 140 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 S100A6P06703 90 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 GNB3P16520 340 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 HNF4GQ14541 408 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 C2orf76Q3KRA6 126 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 DCAF12L2Q5VW00 463 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 FAHD2BQ6P2I3 314 aaPredicted RBP8.89□□□□□ -0.99
COL6A3-205ENST00000392004 ZNF519Q8TB69 540 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 KLF14Q8TD94 323 aaPredicted RBP8.89□□□□□ -0.99
COL6A3-205ENST00000392004 RNF133Q8WVZ7 376 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 FAHD2AQ96GK7 314 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 RASL12Q9NYN1 266 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 POLDIP2Q9Y2S7 368 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 HELZ2Q9BYK8 2649 aaKnown RBP8.89□□□□□ -0.99
COL6A3-205ENST00000392004 IGHV3OR16-10A0A075B7F0 116 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 IGHV3-43A0A0B4J1X8 118 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 NKX6-3A6NJ46 265 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 A8MXE2 369 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 J3QKU1 62 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 ONECUT2O95948 504 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 IGHV3-43DP0DP04 118 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 HOXB1P14653 301 aaPredicted RBP8.89□□□□□ -0.99
COL6A3-205ENST00000392004 RPS2P15880 293 aaKnown RBP8.89□□□□□ -0.99
COL6A3-205ENST00000392004 EPHA1P21709 976 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 OMGP23515 440 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 CD40P25942 277 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 NAAAQ02083 359 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 TLE4Q04727 773 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 ZNF474Q6S9Z5 364 aaPredicted RBP8.89□□□□□ -0.99
COL6A3-205ENST00000392004 CDC20BQ86Y33 519 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 SEH1LQ96EE3 360 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 EHFQ9NZC4 300 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 TRAV8-7A0A075B6U6 113 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 PRSS47A8MTI9 375 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 DIRAS3O95661 229 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 IFI6P09912 130 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 THBS4P35443 961 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 CEBPDP49716 269 aaPredicted RBP8.89□□□□□ -0.99
COL6A3-205ENST00000392004 MEOX2P50222 304 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 UQCC3Q6UW78 93 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 MAPK1IP1LQ8NDC0 245 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 OR10V1Q8NGI7 309 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 SGK3Q96BR1 496 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 MEMO1Q9Y316 297 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 H7C417 338 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 SFTPBP07988 381 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 GSTP1P09211 210 aaKnown RBP8.89□□□□□ -0.99
COL6A3-205ENST00000392004 PI3P19957 117 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 AKR1C2P52895 323 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 C2orf68Q2NKX9 166 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 IGSF11Q5DX21 431 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 MS4A5Q9H3V2 200 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 MTFP1Q9UDX5 166 aa8.89□□□□□ -0.99
COL6A3-205ENST00000392004 FN1P02751 2386 aaKnown RBP8.89□□□□□ -0.99
COL6A3-205ENST00000392004 OR2F2O95006 317 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 RAC2P15153 192 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 CPT2P23786 658 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 CD34P28906 385 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 CD80P33681 288 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 OR2F1Q13607 317 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 FAM189A2Q15884 450 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 KHDC1LQ5JSQ8 128 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 ZNF230Q9UIE0 474 aaPredicted RBP8.88□□□□□ -0.99
COL6A3-205ENST00000392004 TNRC6AQ8NDV7 1962 aaKnown RBP8.88□□□□□ -0.99
COL6A3-205ENST00000392004 TMEM82A0PJX8 343 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 GPR31O00270 319 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 RAB3DO95716 219 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 CYB5R3P00387 301 aaPredicted RBP8.88□□□□□ -0.99
COL6A3-205ENST00000392004 TTRP02766 147 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 CA7P43166 264 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 GNG10P50151 68 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 ACTBP60709 375 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 ACTG1P63261 375 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 AKR1C1Q04828 323 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 UNQ9370/PRO34162Q6UXP9 181 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 SLC36A1Q7Z2H8 476 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 OR2W3Q7Z3T1 314 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 DYRK2Q92630 601 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 ZNF426Q9BUY5 554 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 KCNK7Q9Y2U2 307 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 ATG2AQ2TAZ0 1938 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 CHD6Q8TD26 2715 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 PIN1P1O15428 100 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 XRCC3O43542 346 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 SNAPINO95295 136 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 CD1AP06126 327 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 HEXAP06865 529 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 RIPPLY2Q5TAB7 128 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 LINC01590Q5TEZ4 76 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 STEAP1BQ6NZ63 245 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 LRP11Q86VZ4 500 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 ARL11Q969Q4 196 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 POFUT1Q9H488 388 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 MOB1AQ9H8S9 216 aa8.88□□□□□ -0.99
COL6A3-205ENST00000392004 WASF3Q9UPY6 502 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms