RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ZNF705AQ6ZN79 300 aaPredicted RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 Q6ZQY7 126 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 LPCAT2Q7L5N7 544 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 CATSPER4Q7RTX7 472 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 SZRD1Q7Z422 152 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 Q86TA4 180 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 DHFR2Q86XF0 187 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC35F2Q8IXU6 374 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 DAW1Q8N136 415 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 CLEC4FQ8N1N0 589 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 NPWQ8N729 165 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 GPR26Q8NDV2 337 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 FAM83FQ8NEG4 500 aaPredicted RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 BPIFCQ8NFQ6 507 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 OR2M7Q8NG81 312 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 OR4D11Q8NGI4 311 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 OR1L8Q8NGR8 309 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 OR2A1Q8NGT9 310 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 OCC1Q8TAD7 63 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 RAB3IL1Q8TBN0 382 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TFGQ92734 400 aaPredicted RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 STMN2Q93045 179 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TMEM106AQ96A25 262 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 FAM162AQ96A26 154 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TMEM230Q96A57 120 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PPWD1Q96BP3 646 aaKnown RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 LRRC39Q96DD0 335 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC39A13Q96H72 371 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 CNDP2Q96KP4 475 aaKnown RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 HSFY1Q96LI6 401 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 C12orf66Q96MD2 445 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 RDH12Q96NR8 316 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 MS4A4EQ96PG1 132 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 GBP5Q96PP8 586 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TGS1Q96RS0 853 aaKnown RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TESK2Q96S53 571 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TEAD3Q99594 435 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 MGLLQ99685 303 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 CCL19Q99731 98 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 MIEN1Q9BRT3 115 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 THUMPD2Q9BTF0 503 aaKnown RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PRR15LQ9BU68 103 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 MND1Q9BWT6 205 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 CDCA4Q9BXL8 241 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PCGF6Q9BYE7 350 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 ACPTQ9BZG2 426 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 NACA2Q9H009 215 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 TSPYL1Q9H0U9 437 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 C11orf49Q9H6J7 331 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 NHEJ1Q9H9Q4 299 aaPredicted RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 MAGEF1Q9HAY2 307 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PLEKHA1Q9HB21 404 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 CD209Q9NNX6 404 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PXMP2Q9NR77 195 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 KCNIP2Q9NS61 270 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 RDH8Q9NYR8 311 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 COPS7AQ9UBW8 275 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 MTFP1Q9UDX5 166 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PGAP2Q9UHJ9 254 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 PTBP2Q9UKA9 531 aaKnown RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC22A14Q9Y267 594 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 NOP58Q9Y2X3 529 aaKnown RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 MFHAS1Q9Y4C4 1052 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 KLF12Q9Y4X4 402 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 RBM7Q9Y580 266 aaKnown RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 U3KQ87 197 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 SMG1Q96Q15 3661 aaKnown RBP-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 SMARCA4P51532 1647 aa-0.72□□□□□ -2.52
TRAJ28-201ENST00000390509 SPAG17Q6Q759 2223 aa-0.72□□□□□ -2.53
TRAJ28-201ENST00000390509 EYSQ5T1H1 3165 aa-0.72□□□□□ -2.53
TRAJ28-201ENST00000390509 SBNO1A3KN83 1393 aa-0.72□□□□□ -2.53
TRAJ28-201ENST00000390509 TLN1Q9Y490 2541 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 TLN2Q9Y4G6 2542 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 UNC13CQ8NB66 2214 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 UNC13BO14795 1591 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 KNL1Q8NG31 2342 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 YLPM1P49750 1951 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 IGHV3OR15-7A0A075B7D8 119 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 A0A087WUU8 490 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 A0A096LNT2 108 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 IGHV1-45A0A0A0MS14 117 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 A0A0A6YYD5 115 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 TRBV6-4A0A1B0GX49 114 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 LRP5LA4QPB2 252 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 PRORSD1PA6NEY8 169 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CCDC160A6NGH7 325 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OOEPA6NGQ2 149 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OR51F1A6NGY5 319 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OR5K4A6NMS3 321 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 SYCE1LA8MT33 242 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 ZNF736B4DX44 427 aaPredicted RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 C21orf140B9A014 251 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 H0YAA0 97 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 H7C2G1 150 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 SIRPB1O00241 398 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 BHLHE40O14503 412 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CPLX1O14810 134 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 PSPHP1O15172 72 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 ACOX3O15254 700 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 P4HA2O15460 535 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms