RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 A0A1W2PPE3 182 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 A0A1W2PQF6 199 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 PATE4P0C8F1 98 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 SSR4P51571 173 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 COTL1Q14019 142 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 COL19A1Q14993 1142 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 YRDCQ86U90 279 aaKnown RBP12.51□□□□□ -0.41
RTF1-201ENST00000389629 BIVMQ86UB2 503 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 ALKBH3Q96Q83 286 aaPredicted RBP12.51□□□□□ -0.41
RTF1-201ENST00000389629 FAM117AQ9C073 453 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 MTCH1Q9NZJ7 389 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 LOC101059948A0A1B0GTJ6 334 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 C5orf52A6NGY3 159 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 KRASP01116 189 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 PCP4P48539 62 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 LINC00114Q6XXX2 140 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 TMEM68Q96MH6 324 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 UBE2CO00762 179 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 SLC25A6P12236 298 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 DPPA3Q6W0C5 159 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 POC1AQ8NBT0 407 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 SVILO95425 2214 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 TDRD6O60522 2096 aaKnown RBP12.51□□□□□ -0.41
RTF1-201ENST00000389629 MTCL1Q9Y4B5 1905 aaKnown RBP12.51□□□□□ -0.41
RTF1-201ENST00000389629 A0A1W2PQD3 144 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 B4DEV8 164 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 BCAT2O15382 392 aaPredicted RBP12.51□□□□□ -0.41
RTF1-201ENST00000389629 MPPED1O15442 326 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 TCF21O43680 179 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 NXPH2O95156 264 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 VAMP5O95183 116 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 EFEMP2O95967 443 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 DANCRP0C864 163 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 ADCYAP1P18509 176 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 FZD5Q13467 585 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 KHDC3LQ587J8 217 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 SYT13Q7L8C5 426 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 H2BFWTQ7Z2G1 175 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 CDH20Q9HBT6 801 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 NAT8Q9UHE5 227 aa12.51□□□□□ -0.41
RTF1-201ENST00000389629 ERRFI1Q9UJM3 462 aaPredicted RBP12.51□□□□□ -0.41
RTF1-201ENST00000389629 C20orf202A1L168 122 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 LINC01387J3KSC0 135 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 TMEM183BQ1AE95 376 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 ADPRHL1Q8NDY3 354 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 OR4C5Q8NGB2 326 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 PINX1Q96BK5 328 aaKnown RBP12.5□□□□□ -0.41
RTF1-201ENST00000389629 DDA1Q9BW61 102 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 Q9N2K0 584 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 LIPT2A6NK58 231 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 SIRPB1O00241 398 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 DTYMKP23919 212 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 STPG1Q5TH74 334 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 PTCRAQ6ISU1 281 aaPredicted RBP12.5□□□□□ -0.41
RTF1-201ENST00000389629 SMIM8Q96KF7 97 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 GPHA2Q96T91 129 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 B4GALT7Q9UBV7 327 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 TANC1Q9C0D5 1861 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 A0A096LPE4 126 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 A0A1W2PPZ6 126 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 FGF16O43320 207 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 EN2P19622 333 aaPredicted RBP12.5□□□□□ -0.41
RTF1-201ENST00000389629 KIF26BQ2KJY2 2108 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 TRIM61Q5EBN2 209 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 FDX2Q6P4F2 183 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 NOL4LQ96MY1 436 aaPredicted RBP12.5□□□□□ -0.41
RTF1-201ENST00000389629 ZNF665Q9H7R5 613 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 GNG12Q9UBI6 72 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 HDGFL3Q9Y3E1 203 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 KIAA1324LA8MWY0 1029 aaPredicted RBP12.5□□□□□ -0.41
RTF1-201ENST00000389629 RAMP1O60894 148 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 RPLP1P05386 114 aaKnown RBP12.5□□□□□ -0.41
RTF1-201ENST00000389629 CD81P60033 236 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 CMTM2Q8TAZ6 248 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 SPSB1Q96BD6 273 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 SHDQ96IW2 340 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 TBX15Q96SF7 602 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 ATP5SQ99766 215 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 G6PC2Q9NQR9 355 aa12.5□□□□□ -0.41
RTF1-201ENST00000389629 UBE2NP61088 152 aaKnown RBP12.49□□□□□ -0.41
RTF1-201ENST00000389629 RANP62826 216 aaKnown RBP12.49□□□□□ -0.41
RTF1-201ENST00000389629 FFAR4Q5NUL3 377 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 OR4A16Q8NH70 328 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 OIT3Q8WWZ8 545 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 OBP2BQ9NPH6 170 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 TGFBR3LH3BV60 316 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 ST8SIA5O15466 376 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 IL2RAP01589 272 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 PNLIPP16233 465 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 HOXA5P20719 270 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 FOLR3P41439 243 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 SLC38A11Q08AI6 406 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 ZNF816Q0VGE8 651 aaPredicted RBP12.49□□□□□ -0.41
RTF1-201ENST00000389629 TEX30Q5JUR7 227 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 OR52M1Q8NGK5 317 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 ZNF721Q8TF20 911 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 MYOZ1Q9NP98 299 aaPredicted RBP12.49□□□□□ -0.41
RTF1-201ENST00000389629 NDUFB7P17568 137 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 RPS23P62266 143 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms