RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 ZNF85Q03923 595 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 AESQ08117 197 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 KIAA2026Q5HYC2 2103 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 DEFB121Q5J5C9 76 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 KHDC1LQ5JSQ8 128 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 FDX2Q6P4F2 183 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 C10orf99Q6UWK7 81 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 THNSL2Q86YJ6 484 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 SAXO1Q8IYX7 474 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 LINC00482Q8N8I6 264 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 OR51D1Q8NGF3 324 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 OR2G2Q8NGZ5 317 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 DPF1Q92782 380 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 FGGYQ96C11 551 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 PCDHB16Q9NRJ7 776 aa14.22□□□□□ -0.13
RPUSD3-201ENST00000383820 IGKV1-12A0A0C4DH73 117 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 IGKV1D-12P01611 117 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 OCM2P0CE71 109 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 OCMP0CE72 109 aaPredicted RBP14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 FAM106CPP0CH98 169 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 ZNF44P15621 663 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 FASP25445 335 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 TP53I3Q53FA7 332 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 EME1Q96AY2 570 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 CIB1Q99828 191 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 NEK6Q9HC98 313 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 OR6C3Q9NZP0 311 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 MOB4Q9Y3A3 225 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 HSPE1-MOB4S4R3N1 261 aa14.21□□□□□ -0.13
RPUSD3-201ENST00000383820 KMT2CQ8NEZ4 4911 aaKnown RBP14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 PSMB11A5LHX3 300 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 FAM172BPA6NC97 362 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 FAM90A18PA6NE21 464 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 FAM90A16PA6NEW6 464 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 FAM90A20PA6NIJ5 464 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 FAM90A9PA6NNJ1 464 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 FAM90A12PA8MX19 464 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 FAM90A5PA8MXJ8 464 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 FAM90A15PP0C7V4 464 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 FAM90A13PP0C7W8 464 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 FAM90A14PP0C7W9 464 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 FAM90A24PP0C7X0 464 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 SLC6A1P30531 599 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 CCR9P51686 369 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 DCTN2Q13561 401 aaKnown RBP14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 C9orf152Q5JTZ5 239 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 KRBOX4Q5JUW0 171 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 C11orf87Q6NUJ2 197 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 OR9G1Q8NH87 305 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 COQ2Q96H96 371 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 MCRIP2Q9BUT9 160 aaKnown RBP14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 GABARAPL3Q9BY60 117 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 FRRS1LQ9P0K9 344 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 AMMECR1Q9Y4X0 333 aaPredicted RBP14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 NBEAL2Q6ZNJ1 2754 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 COL7A1Q02388 2944 aa14.2□□□□□ -0.14
RPUSD3-201ENST00000383820 SH2D7A6NKC9 451 aaPredicted RBP14.19□□□□□ -0.14
RPUSD3-201ENST00000383820 FCGR1AP12314 374 aa14.19□□□□□ -0.14
RPUSD3-201ENST00000383820 POLR2IP36954 125 aaKnown RBP14.19□□□□□ -0.14
RPUSD3-201ENST00000383820 OR3A4PP47883 348 aa14.19□□□□□ -0.14
RPUSD3-201ENST00000383820 C17orf58Q2M2W7 97 aa14.19□□□□□ -0.14
RPUSD3-201ENST00000383820 Q6P435 159 aa14.19□□□□□ -0.14
RPUSD3-201ENST00000383820 MRPL41Q8IXM3 137 aaKnown RBP14.19□□□□□ -0.14
RPUSD3-201ENST00000383820 CHPT1Q8WUD6 406 aa14.19□□□□□ -0.14
RPUSD3-201ENST00000383820 RFT1Q96AA3 541 aa14.19□□□□□ -0.14
RPUSD3-201ENST00000383820 B9D2Q9BPU9 175 aa14.19□□□□□ -0.14
RPUSD3-201ENST00000383820 NCOR1P1Q9H4R4 102 aa14.19□□□□□ -0.14
RPUSD3-201ENST00000383820 ZMAT5Q9UDW3 170 aaKnown RBP14.19□□□□□ -0.14
RPUSD3-201ENST00000383820 KBTBD11-OT1A0A1B0GTJ5 212 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 SLC33A1O00400 549 aaPredicted RBP14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 CGB3P0DN86 165 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 CGB7P0DN87 165 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 DBTP11182 482 aaKnown RBP14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 HOXD3P31249 432 aaPredicted RBP14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 THBS3P49746 956 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 RPL23AP62750 156 aaKnown RBP14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 CD69Q07108 199 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 SCN1BQ07699 218 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 RBM39Q14498 530 aaKnown RBP14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 ETV3LQ6ZN32 361 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 OR13C9Q8NGT0 318 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 TRUB1Q8WWH5 349 aaKnown RBP14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 TOMM40LQ969M1 308 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 RPEQ96AT9 228 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 KIRREL1Q96J84 757 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 ZFP57Q9NU63 452 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 AP4S1Q9Y587 144 aa14.18□□□□□ -0.14
RPUSD3-201ENST00000383820 DEGS1O15121 323 aa14.17□□□□□ -0.14
RPUSD3-201ENST00000383820 SLC16A6O15403 523 aa14.17□□□□□ -0.14
RPUSD3-201ENST00000383820 FGF16O43320 207 aa14.17□□□□□ -0.14
RPUSD3-201ENST00000383820 HTR1AP08908 422 aa14.17□□□□□ -0.14
RPUSD3-201ENST00000383820 NANOS3P60323 173 aaKnown RBP14.17□□□□□ -0.14
RPUSD3-201ENST00000383820 AMIGO2Q86SJ2 522 aa14.17□□□□□ -0.14
RPUSD3-201ENST00000383820 COMMD1Q8N668 190 aa14.17□□□□□ -0.14
RPUSD3-201ENST00000383820 ZNF565Q8N9K5 539 aa14.17□□□□□ -0.14
RPUSD3-201ENST00000383820 OR5D18Q8NGL1 313 aa14.17□□□□□ -0.14
RPUSD3-201ENST00000383820 OR13C3Q8NGS6 347 aa14.17□□□□□ -0.14
RPUSD3-201ENST00000383820 WWC2-AS2Q96NR7 200 aa14.17□□□□□ -0.14
RPUSD3-201ENST00000383820 SPACA5Q96QH8 159 aa14.17□□□□□ -0.14
RPUSD3-201ENST00000383820 ZNF649Q9BS31 505 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms