RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 MTNR1BP49286 362 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 BMXP51813 675 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 GP2P55259 537 aaKnown RBP9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 PPP3R1P63098 170 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 BLMHQ13867 455 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 ZNF782Q6ZMW2 699 aaPredicted RBP9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 SATL1Q86VE3 508 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 LYPD6Q86Y78 171 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 OR51T1Q8NGJ9 327 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 GCDHQ92947 438 aaPredicted RBP9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 MYDGFQ969H8 173 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 SLC25A28Q96A46 364 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 CPNE2Q96FN4 548 aaPredicted RBP9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 COQ2Q96H96 371 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 GPER1Q99527 375 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 ZNF184Q99676 751 aaPredicted RBP9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 FAM192AQ9GZU8 254 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 PPA2Q9H2U2 334 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 SCN3BQ9NY72 215 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 IL36GQ9NZH8 169 aa9.4□□□□□ -0.9
APOBEC3F-202ENST00000381565 VWFP04275 2813 aa9.4□□□□□ -0.91
APOBEC3F-202ENST00000381565 A0A0G2JK05 382 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 MEIOCA2RUB1 952 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 SH2D1BO14796 132 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 MGST3O14880 152 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 MAGEB3O15480 346 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 RBP4P02753 201 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 CSN2P05814 226 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 ZNF728P0DKX0 622 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 ZNF44P15621 663 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 ERP29P30040 261 aaKnown RBP9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 VHLP40337 213 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 PTGFRP43088 359 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 P2RX3P56373 397 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 MEF2CQ06413 473 aaPredicted RBP9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 ATXN7L3Q14CW9 347 aaPredicted RBP9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 SPHARQ15513 63 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 PIGYQ3MUY2 71 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 AWAT1Q58HT5 328 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 TMEM86BQ8N661 226 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 TBC1D15Q8TC07 691 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 SSMEM1Q8WWF3 244 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 CNBD2Q96M20 576 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 ZNF714Q96N38 554 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 TNFRSF19Q9NS68 423 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 RAB26Q9ULW5 256 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 TPRKBQ9Y3C4 175 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 POMT1Q9Y6A1 747 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 LINC00312Q9Y6C7 94 aa9.39□□□□□ -0.91
APOBEC3F-202ENST00000381565 TRAV24A0A0B4J272 114 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 A0A1W2PP11 408 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 A0A1W2PPH5 198 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 ODF3BA8MYP8 253 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 RGS10O43665 173 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 SC5DO75845 299 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 FBP1P09467 338 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 IGHV1-8P0DP01 117 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 COX7A1P24310 79 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 EEF1B2P24534 225 aaKnown RBP9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 PAX6P26367 422 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 TGFBR2P37173 567 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 GLIPR1P48060 266 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 AESQ08117 197 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 IL13RA2Q14627 380 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 RSU1Q15404 277 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 MED22Q15528 200 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 TAF9Q16594 264 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 MIDNQ504T8 468 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 NHLRC3Q5JS37 347 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 LDLRAD2Q5SZI1 272 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 FAM27D1Q5T7N8 215 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 C16orf87Q6PH81 154 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 UNQ9370/PRO34162Q6UXP9 181 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 CHST4Q8NCG5 386 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 NR1H4Q96RI1 486 aaPredicted RBP9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 PPIL3Q9H2H8 161 aaKnown RBP9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 GLS2Q9UI32 602 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 FOXJ3Q9UPW0 622 aa9.38□□□□□ -0.91
APOBEC3F-202ENST00000381565 hADV38S2A0JD32 116 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 FAM181BA6NEQ2 426 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 MMP23AO75900 390 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 CLPXO76031 633 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 HTR3BO95264 441 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 MAS1P04201 325 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 SERPINA2P20848 420 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 GDNFP39905 211 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 MAP2K4P45985 399 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 RBM11P57052 281 aaKnown RBP9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 SCN1BQ07699 218 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 PDLIM3Q53GG5 364 aaPredicted RBP9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 LIPKQ5VXJ0 399 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 BAIAP2L2Q6UXY1 529 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 PRSS48Q7RTY5 328 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 DYNAPQ8N1N2 210 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 OR4D6Q8NGJ1 314 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 PLPPR1Q8TBJ4 325 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 MUL1Q969V5 352 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 CYYR1Q96J86 154 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 TMED9Q9BVK6 235 aa9.37□□□□□ -0.91
APOBEC3F-202ENST00000381565 CKLFQ9UBR5 152 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms