RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 GINS1Q14691 196 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 SRSF7Q16629 238 aaKnown RBP eCLIP13.47□□□□□ -0.25
HMGN1-203ENST00000380748 CD300LDQ6UXZ3 194 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 Q8IYB0 196 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 COQ2Q96H96 371 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 MOB1AQ9H8S9 216 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 GNB4Q9HAV0 340 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 OR52A1Q9UKL2 312 aa13.47□□□□□ -0.25
HMGN1-203ENST00000380748 SAMHD1Q9Y3Z3 626 aaKnown RBP13.47□□□□□ -0.25
HMGN1-203ENST00000380748 FUOMA2VDF0 154 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 NCBP2LA6PVI3 153 aaKnown RBP13.46□□□□□ -0.25
HMGN1-203ENST00000380748 J3QR06 171 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 SAP30O75446 220 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 POU3F4P49335 361 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 FUT6P51993 359 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 MADCAM1Q13477 382 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 APOFQ13790 326 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 SPIN3Q5JUX0 258 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 FAM53AQ6NSI3 398 aaPredicted RBP13.46□□□□□ -0.25
HMGN1-203ENST00000380748 TGIF2LXQ8IUE1 241 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 OR8H3Q8N146 312 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 Q8N9W7 124 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 OR10G2Q8NGC3 310 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 OR1N2Q8NGR9 330 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 ASB17Q8WXJ9 295 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 DCUN1D4Q92564 292 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 APOL4Q9BPW4 351 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 EXOSC4Q9NPD3 245 aaKnown RBP13.46□□□□□ -0.25
HMGN1-203ENST00000380748 LIN7CQ9NUP9 197 aaKnown RBP13.46□□□□□ -0.25
HMGN1-203ENST00000380748 R4GMQ9 66 aa13.46□□□□□ -0.25
HMGN1-203ENST00000380748 IGHV3-72A0A0B4J1Y9 119 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 CCDC182A6NF36 153 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 ZNF729A6NN14 1252 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-203ENST00000380748 CCDC22O60826 627 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 IGHV4-30-4P0DP06 118 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 CCL1P22362 96 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 PSMB8P28062 276 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 RAB7AP51149 207 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 GNB1P62873 340 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 ZNF616Q08AN1 781 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 ODF4Q2M2E3 257 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 KRBOX4Q5JUW0 171 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 LHFPL2Q6ZUX7 228 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 MYOZ3Q8TDC0 251 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 BORCS8Q96FH0 119 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 EAF1Q96JC9 268 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-203ENST00000380748 OR5B12Q96R08 314 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 FEVQ99581 238 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 HSPB9Q9BQS6 159 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 PLEKHA1Q9HB21 404 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 GSTK1Q9Y2Q3 226 aa13.45□□□□□ -0.26
HMGN1-203ENST00000380748 KBTBD11-OT1A0A1B0GTJ5 212 aa13.44□□□□□ -0.26
HMGN1-203ENST00000380748 RBMY1BA6NDE4 496 aaKnown RBP13.44□□□□□ -0.26
HMGN1-203ENST00000380748 RBMY1EA6NEQ0 496 aaKnown RBP13.44□□□□□ -0.26
HMGN1-203ENST00000380748 I3L521 148 aa13.44□□□□□ -0.26
HMGN1-203ENST00000380748 OVOL1O14753 267 aa13.44□□□□□ -0.26
HMGN1-203ENST00000380748 SH2D1BO14796 132 aa13.44□□□□□ -0.26
HMGN1-203ENST00000380748 RRP9O43818 475 aaKnown RBP13.44□□□□□ -0.26
HMGN1-203ENST00000380748 E2F6O75461 281 aa13.44□□□□□ -0.26
HMGN1-203ENST00000380748 RBMY1DP0C7P1 496 aaKnown RBP13.44□□□□□ -0.26
HMGN1-203ENST00000380748 GNG10P50151 68 aa13.44□□□□□ -0.26
HMGN1-203ENST00000380748 EBI3Q14213 229 aa13.44□□□□□ -0.26
HMGN1-203ENST00000380748 Q8N6K4 173 aa13.44□□□□□ -0.26
HMGN1-203ENST00000380748 CMTM5Q96DZ9 223 aa13.44□□□□□ -0.26
HMGN1-203ENST00000380748 PPIL3Q9H2H8 161 aaKnown RBP13.44□□□□□ -0.26
HMGN1-203ENST00000380748 REEP1Q9H902 201 aa13.44□□□□□ -0.26
HMGN1-203ENST00000380748 HMG20AQ9NP66 347 aa13.44□□□□□ -0.26
HMGN1-203ENST00000380748 PSG11Q9UQ72 335 aa13.44□□□□□ -0.26
HMGN1-203ENST00000380748 GATBO75879 557 aaKnown RBP13.43□□□□□ -0.26
HMGN1-203ENST00000380748 VDAC1P21796 283 aa13.43□□□□□ -0.26
HMGN1-203ENST00000380748 MYF6P23409 242 aa13.43□□□□□ -0.26
HMGN1-203ENST00000380748 GABPB1Q06547 395 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-203ENST00000380748 KIAA0141Q14154 515 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-203ENST00000380748 ATXN7L3Q14CW9 347 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-203ENST00000380748 OR2T5Q6IEZ7 315 aa13.43□□□□□ -0.26
HMGN1-203ENST00000380748 CYP2R1Q6VVX0 501 aa13.43□□□□□ -0.26
HMGN1-203ENST00000380748 CATSPERDQ86XM0 798 aa13.43□□□□□ -0.26
HMGN1-203ENST00000380748 OR2T29Q8NH02 315 aa13.43□□□□□ -0.26
HMGN1-203ENST00000380748 KCTD7Q96MP8 289 aa13.43□□□□□ -0.26
HMGN1-203ENST00000380748 CHST5Q9GZS9 411 aa13.43□□□□□ -0.26
HMGN1-203ENST00000380748 KLK15Q9H2R5 256 aa13.43□□□□□ -0.26
HMGN1-203ENST00000380748 TMEM14AQ9Y6G1 99 aa13.43□□□□□ -0.26
HMGN1-203ENST00000380748 HMGN1P05114 100 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 CGB3P0DN86 165 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 CGB7P0DN87 165 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 ATP6V1B2P21281 511 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 GLP1RP43220 463 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 REG1BP48304 166 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 SCN1BQ07699 218 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 BNIP1Q12981 228 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 LTC4SQ16873 150 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 ZNF322Q6U7Q0 402 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-203ENST00000380748 MOB3BQ86TA1 216 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 HAVCR2Q8TDQ0 301 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 DLX4Q92988 240 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-203ENST00000380748 PLSCR3Q9NRY6 295 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 C19orf73Q9NVV2 129 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 CALYQ9NYX4 217 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 SNX5Q9Y5X3 404 aa13.42□□□□□ -0.26
HMGN1-203ENST00000380748 A0A1W2PPE3 182 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms