RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 LIME1Q9H400 295 aa19.75■□□□□ 0.75
VPS16-201ENST00000380443 POLDIP2Q9Y2S7 368 aa19.75■□□□□ 0.75
VPS16-201ENST00000380443 RAXQ9Y2V3 346 aa19.75■□□□□ 0.75
VPS16-201ENST00000380443 IQCF6A8MYZ5 107 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 SYNGR1O43759 233 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 LYZL6O75951 148 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 NMBP08949 121 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 PRKACAP17612 351 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 CA6P23280 308 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 IDH3GP51553 393 aaPredicted RBP19.74■□□□□ 0.75
VPS16-201ENST00000380443 EIF2S3LQ2VIR3 472 aaKnown RBP19.74■□□□□ 0.75
VPS16-201ENST00000380443 RGS7BPQ6MZT1 257 aaPredicted RBP19.74■□□□□ 0.75
VPS16-201ENST00000380443 PDZD9Q8IXQ8 264 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 DCUN1D4Q92564 292 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 MARS2Q96GW9 593 aaKnown RBP19.74■□□□□ 0.75
VPS16-201ENST00000380443 FAM221AA4D161 298 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 DIRAS3O95661 229 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 IGKV3-15P01624 115 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 UCP2P55851 309 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 P2RX3P56373 397 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 PDCD1Q15116 288 aa19.74■□□□□ 0.75
VPS16-201ENST00000380443 ZNHIT1O43257 154 aa19.73■□□□□ 0.75
VPS16-201ENST00000380443 SPDEFO95238 335 aa19.73■□□□□ 0.75
VPS16-201ENST00000380443 TK1P04183 234 aa19.73■□□□□ 0.75
VPS16-201ENST00000380443 ACAA1P09110 424 aaPredicted RBP19.73■□□□□ 0.75
VPS16-201ENST00000380443 NAAAQ02083 359 aa19.73■□□□□ 0.75
VPS16-201ENST00000380443 P2RY6Q15077 328 aa19.73■□□□□ 0.75
VPS16-201ENST00000380443 RTN4IP1Q8WWV3 396 aaPredicted RBP19.73■□□□□ 0.75
VPS16-201ENST00000380443 TOMM40LQ969M1 308 aa19.73■□□□□ 0.75
VPS16-201ENST00000380443 OR10C1Q96KK4 312 aa19.73■□□□□ 0.75
VPS16-201ENST00000380443 PFDN2Q9UHV9 154 aa19.73■□□□□ 0.75
VPS16-201ENST00000380443 hCG_1807616A0A1W2PRN6 198 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 TMEM210A6NLX4 147 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 TRDCB7Z8K6 153 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 F8VVB4 439 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 F8VWA3 439 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 ATXN7L3Q14CW9 347 aaPredicted RBP19.72■□□□□ 0.75
VPS16-201ENST00000380443 Q6ZS92 163 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 FAM169BQ8N8A8 192 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 SLX1AQ9BQ83 275 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 ZFP57Q9NU63 452 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 TREM2Q9NZC2 230 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 ATP23Q9Y6H3 246 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 DMXL2Q8TDJ6 3036 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 MBD3L4A6NDZ8 208 aaPredicted RBP19.72■□□□□ 0.75
VPS16-201ENST00000380443 MBD3L3A6NE82 208 aaPredicted RBP19.72■□□□□ 0.75
VPS16-201ENST00000380443 MBD3L5A6NJ08 208 aaPredicted RBP19.72■□□□□ 0.75
VPS16-201ENST00000380443 H7C1Q1 480 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 LILRA1O75019 489 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 PPYP01298 95 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 HOXB5P09067 269 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 MDH2P40926 338 aaKnown RBP19.72■□□□□ 0.75
VPS16-201ENST00000380443 TMEM187Q14656 261 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 AANATQ16613 207 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 MBD3L2Q8NHZ7 208 aaPredicted RBP19.72■□□□□ 0.75
VPS16-201ENST00000380443 STOML3Q8TAV4 291 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 AQP10Q96PS8 301 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 TAAR6Q96RI8 345 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 ZNF471Q9BX82 626 aaPredicted RBP19.72■□□□□ 0.75
VPS16-201ENST00000380443 OR2J1Q9GZK6 312 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 OR51B6Q9H340 312 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 SLC2A9Q9NRM0 540 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 TUBD1Q9UJT1 453 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 PROCRQ9UNN8 238 aa19.72■□□□□ 0.75
VPS16-201ENST00000380443 ACACBO00763 2458 aa19.71■□□□□ 0.75
VPS16-201ENST00000380443 KLK10O43240 276 aa19.71■□□□□ 0.75
VPS16-201ENST00000380443 PDGFAP04085 211 aa19.71■□□□□ 0.75
VPS16-201ENST00000380443 CELA3BP08861 270 aa19.71■□□□□ 0.75
VPS16-201ENST00000380443 SRPXP78539 464 aa19.71■□□□□ 0.75
VPS16-201ENST00000380443 WDR31Q8NA23 367 aa19.71■□□□□ 0.75
VPS16-201ENST00000380443 SUMF2Q8NBJ7 301 aa19.71■□□□□ 0.75
VPS16-201ENST00000380443 SLC25A40Q8TBP6 338 aa19.71■□□□□ 0.75
VPS16-201ENST00000380443 NEK7Q8TDX7 302 aa19.71■□□□□ 0.75
VPS16-201ENST00000380443 RASL12Q9NYN1 266 aa19.71■□□□□ 0.75
VPS16-201ENST00000380443 F5H0A9 414 aaPredicted RBP19.7■□□□□ 0.74
VPS16-201ENST00000380443 H0YIZ8 118 aa19.7■□□□□ 0.74
VPS16-201ENST00000380443 AADACP22760 399 aa19.7■□□□□ 0.74
VPS16-201ENST00000380443 FXYD4P59646 89 aa19.7■□□□□ 0.74
VPS16-201ENST00000380443 RND3P61587 244 aa19.7■□□□□ 0.74
VPS16-201ENST00000380443 SPATA46Q5T0L3 261 aa19.7■□□□□ 0.74
VPS16-201ENST00000380443 VWA1Q6PCB0 445 aa19.7■□□□□ 0.74
VPS16-201ENST00000380443 Q6ZPA2 131 aa19.7■□□□□ 0.74
VPS16-201ENST00000380443 LGI3Q8N145 548 aa19.7■□□□□ 0.74
VPS16-201ENST00000380443 OR1J1Q8NGS3 322 aa19.7■□□□□ 0.74
VPS16-201ENST00000380443 LRRC20Q8TCA0 184 aa19.7■□□□□ 0.74
VPS16-201ENST00000380443 FBXO9Q9UK97 447 aaPredicted RBP19.7■□□□□ 0.74
VPS16-201ENST00000380443 SESN1Q9Y6P5 492 aa19.7■□□□□ 0.74
VPS16-201ENST00000380443 CRYABP02511 175 aaKnown RBP19.69■□□□□ 0.74
VPS16-201ENST00000380443 RLN2P04090 185 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 LUMP51884 338 aaPredicted RBP19.69■□□□□ 0.74
VPS16-201ENST00000380443 IAH1Q2TAA2 248 aaPredicted RBP19.69■□□□□ 0.74
VPS16-201ENST00000380443 TOR2AQ5JU69 321 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 SHEQ5VZ18 495 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 ZNF880Q6PDB4 577 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 LIAT1Q6ZQX7 453 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 BEND4Q6ZU67 534 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 MYPOPQ86VE0 399 aaPredicted RBP19.69■□□□□ 0.74
VPS16-201ENST00000380443 HS3ST6Q96QI5 342 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 PRR13Q9NZ81 148 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 AMDHD2Q9Y303 409 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms