RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 SPACA5Q96QH8 159 aa18.37■□□□□ 0.53
U2AF1-202ENST00000380276 ENOPH1Q9UHY7 261 aa18.37■□□□□ 0.53
U2AF1-202ENST00000380276 MOB4Q9Y3A3 225 aa18.37■□□□□ 0.53
U2AF1-202ENST00000380276 HSPE1-MOB4S4R3N1 261 aa18.37■□□□□ 0.53
U2AF1-202ENST00000380276 ODAMA1E959 279 aa18.36■□□□□ 0.53
U2AF1-202ENST00000380276 FAM106CPP0CH98 169 aa18.36■□□□□ 0.53
U2AF1-202ENST00000380276 BNIP1Q12981 228 aa18.36■□□□□ 0.53
U2AF1-202ENST00000380276 MRPL41Q8IXM3 137 aaKnown RBP18.36■□□□□ 0.53
U2AF1-202ENST00000380276 CORO2AQ92828 525 aa18.36■□□□□ 0.53
U2AF1-202ENST00000380276 TOMM40LQ969M1 308 aa18.36■□□□□ 0.53
U2AF1-202ENST00000380276 RPEQ96AT9 228 aa18.36■□□□□ 0.53
U2AF1-202ENST00000380276 HHLA2Q9UM44 414 aa18.36■□□□□ 0.53
U2AF1-202ENST00000380276 IGKV1-12A0A0C4DH73 117 aa18.35■□□□□ 0.53
U2AF1-202ENST00000380276 IGKV1D-12P01611 117 aa18.35■□□□□ 0.53
U2AF1-202ENST00000380276 CD34P28906 385 aa18.35■□□□□ 0.53
U2AF1-202ENST00000380276 ZNF85Q03923 595 aa18.35■□□□□ 0.53
U2AF1-202ENST00000380276 HES1Q14469 280 aa18.35■□□□□ 0.53
U2AF1-202ENST00000380276 KDM4DQ6B0I6 523 aa18.35■□□□□ 0.53
U2AF1-202ENST00000380276 UTS2BQ765I0 119 aa18.35■□□□□ 0.53
U2AF1-202ENST00000380276 ZDHHC13Q8IUH4 622 aa18.35■□□□□ 0.53
U2AF1-202ENST00000380276 SPSB1Q96BD6 273 aa18.35■□□□□ 0.53
U2AF1-202ENST00000380276 RIBC2Q9H4K1 309 aa18.35■□□□□ 0.53
U2AF1-202ENST00000380276 HSPB6O14558 160 aa18.34■□□□□ 0.53
U2AF1-202ENST00000380276 SNRNP70P08621 437 aaKnown RBP18.34■□□□□ 0.53
U2AF1-202ENST00000380276 EGFEM1PQ0D2K5 195 aa18.34■□□□□ 0.53
U2AF1-202ENST00000380276 ATP6AP1Q15904 470 aa18.34■□□□□ 0.53
U2AF1-202ENST00000380276 OR13C3Q8NGS6 347 aa18.34■□□□□ 0.53
U2AF1-202ENST00000380276 OR13C9Q8NGT0 318 aa18.34■□□□□ 0.53
U2AF1-202ENST00000380276 OR2G2Q8NGZ5 317 aa18.34■□□□□ 0.53
U2AF1-202ENST00000380276 WWC2-AS2Q96NR7 200 aa18.34■□□□□ 0.53
U2AF1-202ENST00000380276 CIB1Q99828 191 aa18.34■□□□□ 0.53
U2AF1-202ENST00000380276 ZNF729A6NN14 1252 aaPredicted RBP18.33■□□□□ 0.52
U2AF1-202ENST00000380276 OOSP1A8MZH6 123 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 DEGS1O15121 323 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 KDM4BO94953 1096 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 IGHV3-7P01780 117 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 GLP1RP43220 463 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 RPL23AP62750 156 aaKnown RBP18.33■□□□□ 0.52
U2AF1-202ENST00000380276 LTC4SQ16873 150 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 ETV3LQ6ZN32 361 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 C8orf86Q6ZUL3 223 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 OR56B4Q8NH76 319 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 RFKQ969G6 155 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 COQ2Q96H96 371 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 NOL4LQ96MY1 436 aaPredicted RBP18.33■□□□□ 0.52
U2AF1-202ENST00000380276 B9D2Q9BPU9 175 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 COMMD4Q9H0A8 199 aa18.33■□□□□ 0.52
U2AF1-202ENST00000380276 PPIL3Q9H2H8 161 aaKnown RBP18.33■□□□□ 0.52
U2AF1-202ENST00000380276 AMMECR1Q9Y4X0 333 aaPredicted RBP18.33■□□□□ 0.52
U2AF1-202ENST00000380276 SERPINE3A8MV23 424 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 LY6LH3BQJ8 138 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 TMEM11P17152 192 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 POLR2IP36954 125 aaKnown RBP18.32■□□□□ 0.52
U2AF1-202ENST00000380276 THBS3P49746 956 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 UTF1Q5T230 341 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 UNQ9370/PRO34162Q6UXP9 181 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 C18orf65Q6ZTR6 163 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 RNF144BQ7Z419 303 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 AMIGO2Q86SJ2 522 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 KLHL30-AS1Q8NEE0 82 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 OR9G1Q8NH87 305 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 LEAP2Q969E1 77 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 EME1Q96AY2 570 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 HRASLS5Q96KN8 279 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 MCRIP2Q9BUT9 160 aaKnown RBP18.32■□□□□ 0.52
U2AF1-202ENST00000380276 GABARAPL1Q9H0R8 117 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 PCDHB16Q9NRJ7 776 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 OR6C3Q9NZP0 311 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 LINC00527Q9UJ94 153 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 KIAA2026Q5HYC2 2103 aa18.32■□□□□ 0.52
U2AF1-202ENST00000380276 SLC33A1O00400 549 aaPredicted RBP18.31■□□□□ 0.52
U2AF1-202ENST00000380276 HCKP08631 526 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 HTR1AP08908 422 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 FASP25445 335 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 LMO1P25800 156 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 RAB25P57735 213 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 HNF4GQ14541 408 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 C17orf58Q2M2W7 97 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 OR2W3Q7Z3T1 314 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 CHST4Q8NCG5 386 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 OR8J1Q8NGP2 316 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 OR10AC1Q8NH08 325 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 CHPT1Q8WUD6 406 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 FRRS1LQ9P0K9 344 aa18.31■□□□□ 0.52
U2AF1-202ENST00000380276 NBEAL2Q6ZNJ1 2754 aa18.3■□□□□ 0.52
U2AF1-202ENST00000380276 CSN2P05814 226 aa18.3■□□□□ 0.52
U2AF1-202ENST00000380276 TMEM225BP0DP42 221 aa18.3■□□□□ 0.52
U2AF1-202ENST00000380276 GNG10P50151 68 aa18.3■□□□□ 0.52
U2AF1-202ENST00000380276 ISL1P61371 349 aa18.3■□□□□ 0.52
U2AF1-202ENST00000380276 TMED1Q13445 227 aa18.3■□□□□ 0.52
U2AF1-202ENST00000380276 DCTN2Q13561 401 aaKnown RBP18.3■□□□□ 0.52
U2AF1-202ENST00000380276 Q6P435 159 aa18.3■□□□□ 0.52
U2AF1-202ENST00000380276 DRAM1Q8N682 238 aa18.3■□□□□ 0.52
U2AF1-202ENST00000380276 OR51A4Q8NGJ6 313 aa18.3■□□□□ 0.52
U2AF1-202ENST00000380276 SLC7A6OSQ96CW6 309 aaPredicted RBP18.3■□□□□ 0.52
U2AF1-202ENST00000380276 KIRREL1Q96J84 757 aa18.3■□□□□ 0.52
U2AF1-202ENST00000380276 NR1H4Q96RI1 486 aaPredicted RBP18.3■□□□□ 0.52
U2AF1-202ENST00000380276 MBOAT4Q96T53 435 aa18.3■□□□□ 0.52
U2AF1-202ENST00000380276 MEIKINA0A087WXM9 373 aa18.29■□□□□ 0.52
U2AF1-202ENST00000380276 A0A087X0M5 115 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms