RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 FAM213BQ8TBF2 198 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 EDARADDQ8WWZ3 215 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 C22orf15Q8WYQ4 148 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 CCL17Q92583 94 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 J3QT63 122 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 TNFAIP6P98066 277 aaPredicted RBP12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 MOGAT2Q3SYC2 334 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 C1orf100Q5SVJ3 147 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 TMEM211Q6ICI0 200 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 OR8G2PQ6IF36 304 aa12.34□□□□□ -0.43
SHROOM1-203ENST00000378679 HELZP42694 1942 aaKnown RBP12.33□□□□□ -0.43
SHROOM1-203ENST00000378679 IGLV3-32A0A0A0MS00 114 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 ZNF98A6NK75 572 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 BCL3P20749 454 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 ATPAF1Q5TC12 328 aaPredicted RBP12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 RPS4Y2Q8TD47 263 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 RNF141Q8WVD5 230 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 PTX4Q96A99 478 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 WNT5BQ9H1J7 359 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 CXXC4Q9H2H0 198 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 PIGMQ9H3S5 423 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 ESRP2Q9H6T0 727 aaKnown RBP12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 CDX4O14627 284 aaPredicted RBP12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 CSRP1P21291 193 aaKnown RBP12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 UCNP55089 124 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 ZNF266Q14584 549 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 P2RY6Q15077 328 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 SCMH1Q96GD3 660 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 ZNF488Q96MN9 340 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 LPAR5Q9H1C0 372 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 AK3Q9UIJ7 227 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 C9orf170A2RU37 121 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 C16orf97H3BN30 126 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 ZNF385CQ66K41 422 aaPredicted RBP12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 ZNF626Q68DY1 528 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 OR10V1Q8NGI7 309 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 HDHD3Q9BSH5 251 aaPredicted RBP12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 RSRP1Q9BUV0 290 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 SUCNR1Q9BXA5 334 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 MRPL13Q9BYD1 178 aaKnown RBP12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 GHITMQ9H3K2 345 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 KCNK7Q9Y2U2 307 aa12.33□□□□□ -0.44
SHROOM1-203ENST00000378679 OTOGLQ3ZCN5 2332 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 MPDZO75970 2070 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 TRAV39A0A0B4J263 110 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 ZNF724A8MTY0 619 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 DAOP14920 347 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 CXCL2P19875 107 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 RPL12P30050 165 aaKnown RBP12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 NKX6-1P78426 367 aaPredicted RBP12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 ENDOGQ14249 297 aaKnown RBP12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 OR4D10Q8NGI6 311 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 LIN7CQ9NUP9 197 aaKnown RBP12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 PRR13Q9NZ81 148 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 SHOXO15266 292 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 AADACP22760 399 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 GAS1P54826 345 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 C4orf17Q53FE4 359 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 KRTCAP3Q53RY4 240 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 MRPL41Q8IXM3 137 aaKnown RBP12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 DYRK2Q92630 601 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 ISOC2Q96AB3 205 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 S1PR3Q99500 378 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 PLXNA2O75051 1894 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 A0A1W2PPV4 95 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 PRR32B1ATL7 298 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 NEURL1O76050 574 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 SULT1A3P0DMM9 295 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 SULT1A4P0DMN0 295 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 CEACAM6P40199 344 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 ALDH3B1P43353 468 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 RPS11P62280 158 aaKnown RBP eCLIP12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 SPANXN5Q5MJ07 72 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 STPG2Q8N412 459 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 RBMXL1Q96E39 390 aaKnown RBP12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 SOX7Q9BT81 388 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 LTBP2Q14767 1821 aa12.32□□□□□ -0.44
SHROOM1-203ENST00000378679 ADAP1O75689 374 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 DUS4LO95620 317 aaKnown RBP12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 OR3A1P47881 315 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 TMEM54Q969K7 222 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 UNKLQ9H9P5 680 aaKnown RBP12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 TREM2Q9NZC2 230 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 GBF1Q92538 1859 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 A0A087WV48 116 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 TRGV10A0A0A0MS01 117 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 LY6G6EA0A0G2JKS1 128 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 KRASP01116 189 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 ZBTB25P24278 435 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 HOXA1P49639 335 aaPredicted RBP12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 UCP2P55851 309 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 LGALS4P56470 323 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 UBE2V2Q15819 145 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 C1orf185Q5T7R7 199 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 PLEKHA3Q9HB20 300 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 U3KQA8 63 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 DNAH14Q0VDD8 3507 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 A0A0U1RQK1 487 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 DEFB108AA8MXU0 73 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 H3BP45 60 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms