RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 IGHV3-64DA0A0J9YX35 117 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 ANKRD34CP0C6C1 535 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 SURF2Q15527 256 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-203ENST00000378391 SMIM21Q3B7S5 101 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 TMEM215Q68D42 235 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 ADAMTS17Q8TE56 1095 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 RAB24Q969Q5 203 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 UBE2L5PA0A1B0GUS4 154 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 SERTM2A0A1B0GWG4 89 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 CFDP00746 253 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-203ENST00000378391 GNG3P63215 75 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 FGF14Q92915 247 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 CLDN23Q96B33 292 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 ZNF707Q96C28 371 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-203ENST00000378391 DEFB127Q9H1M4 99 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 NAA60Q9H7X0 242 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 FBXL17Q9UF56 701 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 OPN4Q9UHM6 478 aa12.87□□□□□ -0.35
PRDM16-203ENST00000378391 MRM2Q9UI43 246 aaKnown RBP12.87□□□□□ -0.35
PRDM16-203ENST00000378391 PATJQ8NI35 1801 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 FAM24AA6NFZ4 105 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 OR5C1Q8NGR4 320 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 ZNF107Q9UII5 783 aaPredicted RBP12.86□□□□□ -0.35
PRDM16-203ENST00000378391 PIKFYVEQ9Y2I7 2098 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 RER1O15258 196 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 CISD3P0C7P0 127 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 FAM157BP0CG42 384 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 UQCRFS1P47985 274 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 PPIAP62937 165 aaKnown RBP12.86□□□□□ -0.35
PRDM16-203ENST00000378391 TMEM241Q24JQ0 296 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 LRRC61Q9BV99 259 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 CNTD2Q9H8S5 307 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 CCDC88CQ9P219 2028 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 TMEM229AB2RXF0 380 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 RECKO95980 971 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 CRYBA1P05813 215 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 OR10X1Q8NGY0 326 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 MRPS24Q96EL2 167 aaKnown RBP12.86□□□□□ -0.35
PRDM16-203ENST00000378391 SHISA3A0PJX4 238 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 CDC14BO60729 498 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 FBP1P09467 338 aa12.86□□□□□ -0.35
PRDM16-203ENST00000378391 METTL12A8MUP2 240 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 SRFP11831 508 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 COX14Q96I36 57 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 DDA1Q9BW61 102 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 GAL3ST2Q9H3Q3 398 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 TMEM30CPA0ZSE6 113 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 ONECUT2O95948 504 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 CTLA4P16410 223 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 CNN1P51911 297 aaKnown RBP12.85□□□□□ -0.35
PRDM16-203ENST00000378391 PLSCR4Q9NRQ2 329 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 CA10Q9NS85 328 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 NTMQ9P121 344 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 PDCD6O75340 191 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 KRASP01116 189 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 HOXC4P09017 264 aaPredicted RBP12.85□□□□□ -0.35
PRDM16-203ENST00000378391 ISXQ2M1V0 245 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 ARTNQ5T4W7 220 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 DEFB108BQ8NET1 73 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 PTP4A1Q93096 173 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 HOXB3P14651 431 aaPredicted RBP12.85□□□□□ -0.35
PRDM16-203ENST00000378391 GPM6AP51674 278 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 ERVFC1-1P60608 527 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 SEZ6L2Q6UXD5 910 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 PRSS41Q7RTY9 318 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 OR10G3Q8NGC4 313 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 TBX15Q96SF7 602 aa12.85□□□□□ -0.35
PRDM16-203ENST00000378391 C3orf85A0A1B0GTC6 90 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 DBX1A6NMT0 343 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 SLC25A17O43808 307 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 HPP00738 406 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 IL2RAP01589 272 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 FAM3AP98173 230 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 ZNF816Q0VGE8 651 aaPredicted RBP12.84□□□□□ -0.35
PRDM16-203ENST00000378391 OCIAD1Q9NX40 245 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 ADAM20O43506 726 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 TMEM33P57088 247 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 NUDT10Q8NFP7 164 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 ALKBH7Q9BT30 221 aaPredicted RBP12.84□□□□□ -0.35
PRDM16-203ENST00000378391 VN1R1Q9GZP7 353 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 PROCRQ9UNN8 238 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 PLPP3O14495 311 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 CXCL2P19875 107 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 RPS16P62249 146 aaKnown RBP12.84□□□□□ -0.35
PRDM16-203ENST00000378391 MRGPREQ86SM8 312 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.84□□□□□ -0.35
PRDM16-203ENST00000378391 MAP1LC3B2A6NCE7 125 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 OR2J3O76001 311 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 CD200P41217 278 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 TUSC5Q8IXB3 177 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 NDFIP1Q9BT67 221 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 MAP1LC3BQ9GZQ8 125 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 SERGEFQ9UGK8 458 aa12.84□□□□□ -0.35
PRDM16-203ENST00000378391 CTSDP07339 412 aaPredicted RBP12.83□□□□□ -0.35
PRDM16-203ENST00000378391 GABRG2P18507 467 aa12.83□□□□□ -0.35
PRDM16-203ENST00000378391 PNRC1Q12796 327 aaPredicted RBP12.83□□□□□ -0.35
PRDM16-203ENST00000378391 IL24Q13007 206 aa12.83□□□□□ -0.35
PRDM16-203ENST00000378391 LPAR3Q9UBY5 353 aa12.83□□□□□ -0.35
PRDM16-203ENST00000378391 CRYM-AS1A6NIL9 109 aa12.83□□□□□ -0.36
PRDM16-203ENST00000378391 IZUMO4Q1ZYL8 232 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms