RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 UBALD1Q8TB05 177 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 ZNF596Q8TC21 504 aa13.23□□□□□ -0.29
NPHP4-201ENST00000378156 ADAP1O75689 374 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 DUS4LO95620 317 aaKnown RBP13.22□□□□□ -0.29
NPHP4-201ENST00000378156 CNN1P51911 297 aaKnown RBP13.22□□□□□ -0.29
NPHP4-201ENST00000378156 ERHP84090 104 aaKnown RBP13.22□□□□□ -0.29
NPHP4-201ENST00000378156 PMP22Q01453 160 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 RAB32Q13637 225 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 C3AR1Q16581 482 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 SLC36A1Q7Z2H8 476 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 LHFPL5Q8TAF8 219 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 MS4A10Q96PG2 267 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 SCN2AQ99250 2005 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 OR5B21A6NL26 309 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 DBX1A6NMT0 343 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 CLEC3BP05452 202 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 ZNF17P17021 662 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 RPL13AP40429 203 aaKnown RBP13.22□□□□□ -0.29
NPHP4-201ENST00000378156 FAHD2BQ6P2I3 314 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-201ENST00000378156 SAP25Q8TEE9 199 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 ABHD3Q8WU67 409 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 FAHD2AQ96GK7 314 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 LOXL4Q96JB6 756 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 TMEM218A2RU14 115 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 HLA-DQB1P01920 261 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 PNRC1Q12796 327 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-201ENST00000378156 C9orf152Q5JTZ5 239 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 NDFIP1Q9BT67 221 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 PRR13Q9NZ81 148 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 SHISA3A0PJX4 238 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 M0R143 59 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 THY1P04216 161 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 SMIM10L1P0DMW3 83 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 KIR3DL2P43630 455 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 SMIM10Q96HG1 83 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 FZR1Q9UM11 496 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 MPC1Q9Y5U8 109 aa13.22□□□□□ -0.29
NPHP4-201ENST00000378156 MASP2O00187 686 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 SOCS1O15524 211 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 TBX6O95947 436 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-201ENST00000378156 ASAH2BP0C7U1 165 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 CD81P60033 236 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 OR2M7Q8NG81 312 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 ERGIC1Q969X5 290 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 CLDN23Q96B33 292 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 TAAR3PQ9P1P4 343 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 KIAA1456Q9P272 454 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 PILRBQ9UKJ0 227 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 ZMIZ1Q9ULJ6 1067 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 NCOR1O75376 2440 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 CST7O76096 145 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 OR5G3P0C626 314 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 IGSF11Q5DX21 431 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 NOL4LQ96MY1 436 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-201ENST00000378156 GPR137Q96N19 417 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 RAB40CQ96S21 281 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 TRAF4Q9BUZ4 470 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-201ENST00000378156 UQCC1Q9NVA1 299 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 NDUFB3O43676 98 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 HNF1AP20823 631 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 ERVFC1-1P60608 527 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 PIK3IP1Q96FE7 263 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 AMELYQ99218 206 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 WDR90Q96KV7 1748 aa13.21□□□□□ -0.29
NPHP4-201ENST00000378156 OPN1MWP04001 364 aa13.21□□□□□ -0.3
NPHP4-201ENST00000378156 OPN1MW2P0DN77 364 aa13.21□□□□□ -0.3
NPHP4-201ENST00000378156 OPN1MW3P0DN78 364 aa13.21□□□□□ -0.3
NPHP4-201ENST00000378156 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.3
NPHP4-201ENST00000378156 RNF133Q8WVZ7 376 aa13.21□□□□□ -0.3
NPHP4-201ENST00000378156 PLPPR2Q96GM1 343 aa13.21□□□□□ -0.3
NPHP4-201ENST00000378156 AICDAQ9GZX7 198 aa13.21□□□□□ -0.3
NPHP4-201ENST00000378156 GALR1P47211 349 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 IL13RA2Q14627 380 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 LRRC10Q5BKY1 277 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 FHL5Q5TD97 284 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 RFESDQ8TAC1 157 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 LINC00052Q96N35 136 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 A0A1W2PR77 199 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 H3BP45 60 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 ZBTB25P24278 435 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 MMP16P51512 607 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 SLC26A10Q8NG04 563 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 PATJQ8NI35 1801 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 ERRFI1Q9UJM3 462 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-201ENST00000378156 SIP14410 1827 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 M0QZK8 103 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 TSPAN2O60636 221 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 GGCTO75223 188 aaKnown RBP13.2□□□□□ -0.3
NPHP4-201ENST00000378156 FGF5P12034 268 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 RPL29P47914 159 aaKnown RBP13.2□□□□□ -0.3
NPHP4-201ENST00000378156 GNB1P62873 340 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 PLPPR5Q32ZL2 321 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 RASL12Q9NYN1 266 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 PTBP3O95758 552 aaKnown RBP13.2□□□□□ -0.3
NPHP4-201ENST00000378156 SP1P08047 785 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 RPS4Y1P22090 263 aaKnown RBP13.2□□□□□ -0.3
NPHP4-201ENST00000378156 KLF3P57682 345 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-201ENST00000378156 CA5BP1Q8WTZ4 195 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 ADGRG7Q96K78 797 aa13.2□□□□□ -0.3
NPHP4-201ENST00000378156 SEC11CQ9BY50 192 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms