RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 LYRM2Q9NU23 88 aaPredicted RBP7.4□□□□□ -1.23
VPS36-201ENST00000378060 STARD10Q9Y365 291 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 ZNF98A6NK75 572 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 ZNF737O75373 536 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 GAPDHP04406 335 aaKnown RBP7.39□□□□□ -1.23
VPS36-201ENST00000378060 NGFRP08138 427 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 LPAR6P43657 344 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 FABP6P51161 128 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 LGALS4P56470 323 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 NXPH1P58417 271 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 PPP1CAP62136 330 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 HIST1H3AP68431 136 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 ZNF273Q14593 569 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 OR2A2Q6IF42 318 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 TMEM92Q6UXU6 159 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 NUFIP2Q7Z417 695 aaKnown RBP7.39□□□□□ -1.23
VPS36-201ENST00000378060 UBALD2Q8IYN6 164 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 TM4SF19Q96DZ7 209 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 TMEM147Q9BVK8 224 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 ZDBF2Q9HCK1 2354 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 DUXBA0A1W2PPF3 345 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 DNPH1O43598 174 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 SYNGR2O43760 224 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 VSIG10L2P0DP72 767 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 EFNB2P52799 333 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 ERVFC1-1P60608 527 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 ROM1Q03395 351 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 BSXQ3C1V8 233 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 COX19Q49B96 90 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 UNQ9370/PRO34162Q6UXP9 181 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 VOPP1Q96AW1 172 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 TPPP3Q9BW30 176 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 DOCK9Q9BZ29 2069 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 H3BMH7 237 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 GPR37O15354 613 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 CRYBA1P05813 215 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 ANKRD34CP0C6C1 535 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 ASAH2BP0C7U1 165 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 TMIGD3P0DMS9 266 aaPredicted RBP7.39□□□□□ -1.23
VPS36-201ENST00000378060 NAT1P18440 290 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 CEACAM6P40199 344 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 ASCL1P50553 236 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 ZP4Q12836 540 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 TMEM104Q8NE00 496 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 OR10X1Q8NGY0 326 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 ZNRF4Q8WWF5 429 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 ATP5SQ99766 215 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 VAMP8Q9BV40 100 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 Q9N2K0 584 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 NAT8Q9UHE5 227 aa7.39□□□□□ -1.23
VPS36-201ENST00000378060 YTHDF2Q9Y5A9 579 aaKnown RBP7.39□□□□□ -1.23
VPS36-201ENST00000378060 TRGV10A0A0A0MS01 117 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 DXOO77932 396 aaKnown RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 HEXAP06865 529 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 HLA-GP17693 338 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 MPV17LQ2QL34 196 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 ZNF660Q6AZW8 331 aaPredicted RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 C19orf48Q6RUI8 117 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 PTPMT1Q8WUK0 201 aaPredicted RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 SLC2A9Q9NRM0 540 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 SH3BGRL2Q9UJC5 107 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 SLC45A2Q9UMX9 530 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 AHCTF1Q8WYP5 2266 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 IGHV3-64DA0A0J9YX35 117 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 CENPVL1A0A0U1RR11 272 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 OR2M5A3KFT3 312 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 M0R1X1 148 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 PPYP01298 95 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 CST2P09228 141 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 PEBP1P30086 187 aaKnown RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 KIR2DL1P43626 348 aaPredicted RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 KIR3DL2P43630 455 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 CDC34P49427 236 aaPredicted RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 SULT1A1P50225 295 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 KRTDAPP60985 99 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 FAM3AP98173 230 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 FUT5Q11128 374 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 PDCD1Q15116 288 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 FAM74A3Q4VXF1 159 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 DEFB108BQ8NET1 73 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 OR2T10Q8NGZ9 312 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 ADAT1Q9BUB4 502 aaKnown RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 MANBALQ9NQG1 85 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 MRPL22Q9NWU5 206 aaKnown RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 RNF24Q9Y225 148 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 IGHV1OR15-9A0A0B4J2B8 117 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 TRDCB7Z8K6 153 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 CA11O75493 328 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 ARG1P05089 322 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 AGFG1P52594 562 aaKnown RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 RPS16P62249 146 aaKnown RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 TMEM267Q0VDI3 215 aaPredicted RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 ACER2Q5QJU3 275 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 C1orf100Q5SVJ3 147 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 D2HGDHQ8N465 521 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 SLC24A4Q8NFF2 622 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 OR10D3Q8NH80 312 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 MRPL24Q96A35 216 aaKnown RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 MS4A10Q96PG2 267 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 TAAR9Q96RI9 348 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms