RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 GLS2Q9UI32 602 aa12.48□□□□□ -0.41
POLR1E-202ENST00000377798 HMX3A6NHT5 357 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 SRRM5B3KS81 715 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 SLC33A1O00400 549 aaPredicted RBP12.47□□□□□ -0.41
POLR1E-202ENST00000377798 KNG1P01042 644 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 ADH4P08319 380 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 ANXA7P20073 488 aaKnown RBP12.47□□□□□ -0.41
POLR1E-202ENST00000377798 ARPC4P59998 168 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 Q6ZPA2 131 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 OVCH2Q7RTZ1 564 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 NEUROG1Q92886 237 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 HPS1Q92902 700 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 PPA2Q9H2U2 334 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 ZNF286AQ9HBT8 521 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 ETAA1Q9NY74 926 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 RASL12Q9NYN1 266 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 EHFQ9NZC4 300 aa12.47□□□□□ -0.41
POLR1E-202ENST00000377798 C17orf100A8MU93 164 aa12.46□□□□□ -0.41
POLR1E-202ENST00000377798 M0R233 179 aa12.46□□□□□ -0.41
POLR1E-202ENST00000377798 SIRPB1O00241 398 aa12.46□□□□□ -0.41
POLR1E-202ENST00000377798 HAND1O96004 215 aa12.46□□□□□ -0.41
POLR1E-202ENST00000377798 RLN1P04808 185 aa12.46□□□□□ -0.41
POLR1E-202ENST00000377798 APOBEC3AP31941 199 aaPredicted RBP12.46□□□□□ -0.41
POLR1E-202ENST00000377798 TSPAN5P62079 268 aa12.46□□□□□ -0.41
POLR1E-202ENST00000377798 HOXA4Q00056 320 aaPredicted RBP12.46□□□□□ -0.41
POLR1E-202ENST00000377798 CD300CQ08708 224 aa12.46□□□□□ -0.41
POLR1E-202ENST00000377798 CDK10Q15131 360 aa12.46□□□□□ -0.41
POLR1E-202ENST00000377798 SRSF7Q16629 238 aaKnown RBP eCLIP12.46□□□□□ -0.41
POLR1E-202ENST00000377798 PAN3Q58A45 887 aaKnown RBP12.46□□□□□ -0.41
POLR1E-202ENST00000377798 SHEQ5VZ18 495 aa12.46□□□□□ -0.41
POLR1E-202ENST00000377798 TMEM17Q86X19 198 aa12.46□□□□□ -0.41
POLR1E-202ENST00000377798 MRGPRFQ96AM1 343 aa12.46□□□□□ -0.41
POLR1E-202ENST00000377798 RIMS4Q9H426 269 aaPredicted RBP12.46□□□□□ -0.41
POLR1E-202ENST00000377798 OR14J1Q9UGF5 321 aa12.46□□□□□ -0.41
POLR1E-202ENST00000377798 TMEM82A0PJX8 343 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 OR2AT4A6NND4 320 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 DEFB108AA8MXU0 73 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 SDCBPO00560 298 aaPredicted RBP12.46□□□□□ -0.42
POLR1E-202ENST00000377798 PLAUP00749 431 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 HNRNPCP07910 306 aaKnown RBP eCLIP12.46□□□□□ -0.42
POLR1E-202ENST00000377798 CD55P08174 381 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 MDH2P40926 338 aaKnown RBP12.46□□□□□ -0.42
POLR1E-202ENST00000377798 RRAS2P62070 204 aaPredicted RBP12.46□□□□□ -0.42
POLR1E-202ENST00000377798 CBX3Q13185 183 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 GRK1Q15835 563 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 METTL11BQ5VVY1 283 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 GLDNQ6ZMI3 551 aaPredicted RBP12.46□□□□□ -0.42
POLR1E-202ENST00000377798 Q6ZS49 121 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 GCSAMQ8N6F7 178 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 TERB2Q8NHR7 220 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 ERGIC1Q969X5 290 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 DACT3Q96B18 629 aaPredicted RBP12.46□□□□□ -0.42
POLR1E-202ENST00000377798 GCM1Q9NP62 436 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 TREM2Q9NZC2 230 aa12.46□□□□□ -0.42
POLR1E-202ENST00000377798 ROS1P08922 2347 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.45□□□□□ -0.42
POLR1E-202ENST00000377798 IL5P05113 134 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 EGR1P18146 543 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 LMO1P25800 156 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 LOXP28300 417 aaPredicted RBP12.45□□□□□ -0.42
POLR1E-202ENST00000377798 EFNB3Q15768 340 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 ATPAF1Q5TC12 328 aaPredicted RBP12.45□□□□□ -0.42
POLR1E-202ENST00000377798 LHFPL1Q86WI0 220 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 FAM90A1Q86YD7 464 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 ZDHHC22Q8N966 263 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 MED30Q96HR3 178 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 BBC3Q96PG8 261 aaPredicted RBP12.45□□□□□ -0.42
POLR1E-202ENST00000377798 TMEM204Q9BSN7 226 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 OR51J1Q9H342 316 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 Q9N2K0 584 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 NECAP2Q9NVZ3 263 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 CISD1Q9NZ45 108 aaKnown RBP12.45□□□□□ -0.42
POLR1E-202ENST00000377798 NPTNQ9Y639 398 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 CACNA1DQ01668 2161 aa12.45□□□□□ -0.42
POLR1E-202ENST00000377798 TRBV6-6A0A0A6YYG2 114 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 B8ZZF3 427 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 CCNKO75909 580 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 LHBP01229 141 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 CEBPDP49716 269 aaPredicted RBP12.44□□□□□ -0.42
POLR1E-202ENST00000377798 TESK1Q15569 626 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 FAM209AQ5JX71 171 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 SLC36A1Q7Z2H8 476 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 MRPL30Q8TCC3 161 aaKnown RBP12.44□□□□□ -0.42
POLR1E-202ENST00000377798 Q8TCH9 128 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 PIK3IP1Q96FE7 263 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 ALX4Q9H161 411 aaPredicted RBP12.44□□□□□ -0.42
POLR1E-202ENST00000377798 TMEM165Q9HC07 324 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 VSIG4Q9Y279 399 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 RFPL4AA6NLU0 287 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 B9A039 149 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 RFPL4AL1F8VTS6 287 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 IFNL4K9M1U5 179 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 OR5H8P0DN80 308 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 VSIG10L2P0DP72 767 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 TNFRSF1AP19438 455 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 RBMXP38159 391 aaKnown RBP12.44□□□□□ -0.42
POLR1E-202ENST00000377798 ZNF672Q499Z4 452 aaPredicted RBP12.44□□□□□ -0.42
POLR1E-202ENST00000377798 TMED4Q7Z7H5 227 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 OR6F1Q8NGZ6 308 aa12.44□□□□□ -0.42
POLR1E-202ENST00000377798 LILRB1Q8NHL6 650 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms