RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 STRADBQ9C0K7 418 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 TRDCB7Z8K6 153 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 C9orf172C9J069 976 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 TUSC2O75896 110 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 F10P00742 488 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 CELA3AP09093 270 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 BCL3P20749 454 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 PAX6P26367 422 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 SNCAP37840 140 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 RFC3P40938 356 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 HMGN3Q15651 99 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 SWI5Q1ZZU3 235 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 MPV17LQ2QL34 196 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM76BQ5HYJ3 339 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 CLEC9AQ6UXN8 241 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 TUSC5Q8IXB3 177 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 GUCD1Q96NT3 240 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 SIGLEC12Q96PQ1 595 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 PAPOLGQ9BWT3 736 aaKnown RBP10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 MTCH1Q9NZJ7 389 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 CRIM1Q9NZV1 1036 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 B4GALT7Q9UBV7 327 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 CACFD1Q9UGQ2 172 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 RCL1Q9Y2P8 373 aaKnown RBP10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 WDR87Q6ZQQ6 2873 aa10.09□□□□□ -0.79
TNFRSF9-201ENST00000377507 TRIOBPQ9H2D6 2365 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 CLEC18AA5D8T8 446 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNF503-AS2A6NEH8 195 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 GLI4P10075 376 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 NFYBP25208 207 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 HAAOP46952 286 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 NHLH2Q02577 135 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 DPPA2Q7Z7J5 298 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZDHHC23Q8IYP9 409 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 KDF1Q8NAX2 398 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 CLEC18CQ8NCF0 446 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 OR5A2Q8NGI9 324 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 SLAMF9Q96A28 289 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 BOD1Q96IK1 185 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 ABHD14BQ96IU4 210 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 HS3ST6Q96QI5 342 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 GPR87Q9BY21 358 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 SMOC1Q9H4F8 434 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 LUZP4Q9P127 313 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 SHANK1Q9Y566 2161 aa10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 TNRC6AQ8NDV7 1962 aaKnown RBP10.08□□□□□ -0.8
TNFRSF9-201ENST00000377507 A0A096LPE4 126 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 DUXBA0A1W2PPF3 345 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 A0A1W2PPZ6 126 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 MEX3AA1L020 520 aaKnown RBP10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 C5orf49A4QMS7 147 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 NKX2-6A6NCS4 301 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 AGPAT2O15120 278 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 HLA-HP01893 362 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 TK1P04183 234 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 FOXG1P55316 489 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 HERPUD1Q15011 391 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 LINC00518Q8N0U6 118 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 POM121L2Q96KW2 1035 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 MLXQ9UH92 298 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 STRAPQ9Y3F4 350 aaKnown RBP10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNF175Q9Y473 711 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 KPTNQ9Y664 436 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 DOCK10Q96BY6 2186 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 TRBV6-6A0A0A6YYG2 114 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 KIR2DS1A0A191URI9 304 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 COLCA2A8K830 154 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 C21orf140B9A014 251 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 SYNGR4O95473 234 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 TSPAN15O95858 294 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 SCTP09683 121 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 CTXN2P0C2S0 81 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 ARR3P36575 388 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 KIR2DS4P43632 304 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 GPM6AP51674 278 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 SRYQ05066 204 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 GNMTQ14749 295 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 KIR2DS1Q14954 304 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 MIDNQ504T8 468 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 ABHD17BQ5VST6 288 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 MRPL21Q7Z2W9 205 aaKnown RBP10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 LINC00596Q86U02 117 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 TBC1D26Q86UD7 250 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 MKXQ8IYA7 352 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 SELENOHQ8IZQ5 122 aaKnown RBP10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 TTTY12Q9BZ98 90 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 EGLN1Q9GZT9 426 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 RIMS4Q9H426 269 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 OPA3Q9H6K4 179 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 CALHM2Q9HA72 323 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 COLQQ9Y215 455 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 ATP23Q9Y6H3 246 aa10.07□□□□□ -0.8
TNFRSF9-201ENST00000377507 KMT2EQ8IZD2 1858 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 A0A1B0GW64 132 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 SLC22A20A6NK97 555 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNF732B4DXR9 585 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 CCL2P13500 99 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 FOLR2P14207 255 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 UCP1P25874 307 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 NOVA1P51513 510 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms