RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 A0A1B0GW55 424 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 ADAM20O43506 726 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 GSTP1P09211 210 aaKnown RBP10.81□□□□□ -0.68
CBWD3-203ENST00000377344 DUX4L2P0CJ85 424 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 DUX4L3P0CJ86 424 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 DUX4L4P0CJ87 422 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 DUX4L5P0CJ88 424 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 DUX4L6P0CJ89 424 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 DUX4L7P0CJ90 424 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 PRSS3P35030 304 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 GNG2P59768 71 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 ATXN7L3Q14CW9 347 aaPredicted RBP10.81□□□□□ -0.68
CBWD3-203ENST00000377344 DUX4L9Q6RFH8 374 aaPredicted RBP10.81□□□□□ -0.68
CBWD3-203ENST00000377344 CLEC2AQ6UVW9 174 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 ZNF788Q6ZQV5 615 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 SLC36A1Q7Z2H8 476 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 MUC20Q8N307 709 aaPredicted RBP10.81□□□□□ -0.68
CBWD3-203ENST00000377344 ZNF561Q8N587 486 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 FAM216BQ8N7L0 139 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 TMEM185AQ8NFB2 350 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 NUDCD2Q8WVJ2 157 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 FAM168AQ92567 244 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 GAFA1Q96PS6 74 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 SOSTQ9BQB4 213 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 RABL2AQ9UBK7 228 aaPredicted RBP10.81□□□□□ -0.68
CBWD3-203ENST00000377344 DUX4Q9UBX2 424 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 RABL2BQ9UNT1 228 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 CSMD2Q7Z408 3487 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 MEIOCA2RUB1 952 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 SERPINE3A8MV23 424 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 J3QRK9 145 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 INHBBP09529 407 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 CD3GP09693 182 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 SELLP14151 372 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 PAX1P15863 534 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 AMY2BP19961 511 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 LMO1P25800 156 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 PTBP1P26599 531 aaKnown RBP eCLIP10.81□□□□□ -0.68
CBWD3-203ENST00000377344 IL13RA1P78552 427 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 GUCA2AQ02747 115 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 GRK1Q15835 563 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 DEFB113Q30KQ7 82 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 HACD4Q5VWC8 232 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 LYPD2Q6UXB3 125 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 C17orf107Q6ZR85 190 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 DCDC5Q6ZRR9 648 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 Q8N402 240 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 SDSLQ96GA7 329 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 MED30Q96HR3 178 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 CMSS1Q9BQ75 279 aaKnown RBP10.81□□□□□ -0.68
CBWD3-203ENST00000377344 CHMP1AQ9HD42 196 aaPredicted RBP10.81□□□□□ -0.68
CBWD3-203ENST00000377344 BEX4Q9NWD9 120 aaPredicted RBP10.81□□□□□ -0.68
CBWD3-203ENST00000377344 ETAA1Q9NY74 926 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 AK3Q9UIJ7 227 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 PCDHB10Q9UN67 800 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 MAB21L2Q9Y586 359 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 SPG11Q96JI7 2443 aa10.81□□□□□ -0.68
CBWD3-203ENST00000377344 TMEM82A0PJX8 343 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 MEIS3P1A6NDR6 274 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 NDUFA2O43678 99 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 DGCR2P98153 550 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 EDDM3AQ14507 147 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 PNLIPRP3Q17RR3 467 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 ATPAF1Q5TC12 328 aaPredicted RBP10.8□□□□□ -0.68
CBWD3-203ENST00000377344 TRAPPC6BQ86SZ2 158 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 OR4S1Q8NGB4 309 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 PPP1R35Q8TAP8 253 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 FCAMRQ8WWV6 532 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 ST8SIA4Q92187 359 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 SNX22Q96L94 193 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 LURAP1Q96LR2 239 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 HDHD3Q9BSH5 251 aaPredicted RBP10.8□□□□□ -0.68
CBWD3-203ENST00000377344 PIMREGQ9BSJ6 248 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 BPESC1Q9GZL8 116 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 SRRQ9GZT4 340 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 DNTTIP1Q9H147 329 aa10.8□□□□□ -0.68
CBWD3-203ENST00000377344 CEACAM18A8MTB9 384 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 SIGLEC5O15389 551 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 ZNF737O75373 536 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 TPPPO94811 219 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 TK1P04183 234 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 GLAP06280 429 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 FCER2P06734 321 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 RPS2P15880 293 aaKnown RBP10.79□□□□□ -0.68
CBWD3-203ENST00000377344 OR3A1P47881 315 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 PPP5CP53041 499 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 OR8H2Q8N162 312 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 SPICQ8N5J4 248 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 GDPD1Q8N9F7 314 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 SEBOXQ9HB31 216 aaPredicted RBP10.79□□□□□ -0.68
CBWD3-203ENST00000377344 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.79□□□□□ -0.68
CBWD3-203ENST00000377344 ABCA12Q86UK0 2595 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 K7N7A8 449 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 CTDSPLO15194 276 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 NDUFB3O43676 98 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 FSTL3O95633 263 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 MELTFP08582 738 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 CSF3P09919 207 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 NDUFB7P17568 137 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 CD40LGP29965 261 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms