RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 FFAR1O14842 300 aa11.96□□□□□ -0.49
GPC6-201ENST00000377047 MS4A7Q9GZW8 240 aaPredicted RBP11.96□□□□□ -0.49
GPC6-201ENST00000377047 ASCC3Q8N3C0 2202 aaKnown RBP11.96□□□□□ -0.5
GPC6-201ENST00000377047 IGKV3-7A0A075B6H7 116 aa11.96□□□□□ -0.5
GPC6-201ENST00000377047 A0A1W2PPQ1 181 aa11.96□□□□□ -0.5
GPC6-201ENST00000377047 C10orf35Q96D05 121 aa11.96□□□□□ -0.5
GPC6-201ENST00000377047 TMEM210A6NLX4 147 aa11.96□□□□□ -0.5
GPC6-201ENST00000377047 J3QT63 122 aa11.96□□□□□ -0.5
GPC6-201ENST00000377047 SEMA7AO75326 666 aa11.96□□□□□ -0.5
GPC6-201ENST00000377047 LY86O95711 162 aa11.96□□□□□ -0.5
GPC6-201ENST00000377047 C1QAP02745 245 aa11.96□□□□□ -0.5
GPC6-201ENST00000377047 APELAP0DMC3 54 aa11.96□□□□□ -0.5
GPC6-201ENST00000377047 SLC45A2Q9UMX9 530 aa11.96□□□□□ -0.5
GPC6-201ENST00000377047 NAAAQ02083 359 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 TSPO2Q5TGU0 170 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 DHRS7BQ6IAN0 325 aaPredicted RBP11.95□□□□□ -0.5
GPC6-201ENST00000377047 ADAMTS17Q8TE56 1095 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 ABHD14AQ9BUJ0 271 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 SLC25A10Q9UBX3 287 aaPredicted RBP11.95□□□□□ -0.5
GPC6-201ENST00000377047 A0A0J9YW62 118 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 FAM24AA6NFZ4 105 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 SOCS1O15524 211 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 IGKV1D-16P01601 117 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 S100A8P05109 93 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 ADRB1P08588 477 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 FGF5P12034 268 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 PJVKQ0ZLH3 352 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 DHRS2Q13268 280 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 C4orf17Q53FE4 359 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 SLC24A4Q8NFF2 622 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 PPIAL4EA0A075B759 164 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 PPIAL4DF5H284 164 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 PPIAL4FP0DN26 164 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 SCAND1P57086 179 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 CCL8P80075 99 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 ZNF528Q3MIS6 628 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 SLC16A12Q6ZSM3 486 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 PPIAL4AQ9Y536 164 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 ARG1P05089 322 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 HOXD4P09016 255 aaPredicted RBP11.95□□□□□ -0.5
GPC6-201ENST00000377047 FAHD2BQ6P2I3 314 aaPredicted RBP11.95□□□□□ -0.5
GPC6-201ENST00000377047 NTNG2Q96CW9 530 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 FAHD2AQ96GK7 314 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 GPR137Q96N19 417 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 TDRD15B5MCY1 1934 aaKnown RBP11.95□□□□□ -0.5
GPC6-201ENST00000377047 DNPH1O43598 174 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 GNG7O60262 68 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 UPK3AO75631 287 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 PIGYQ3MUY2 71 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 FOXB2Q5VYV0 432 aa11.95□□□□□ -0.5
GPC6-201ENST00000377047 MYPOPQ86VE0 399 aaPredicted RBP11.95□□□□□ -0.5
GPC6-201ENST00000377047 GZMHP20718 246 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 ATP1A1-AS1Q5TC04 95 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 C2CD4CQ8TF44 421 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 DEFA6Q01524 100 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 ECSCRQ19T08 205 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 DYNLRB2Q8TF09 96 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 GYPAP02724 150 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 RAB32Q13637 225 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 DMKNQ6E0U4 476 aaPredicted RBP11.94□□□□□ -0.5
GPC6-201ENST00000377047 MUC20Q8N307 709 aaPredicted RBP11.94□□□□□ -0.5
GPC6-201ENST00000377047 TMEM74BQ9NUR3 256 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 SCN3AQ9NY46 2000 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 LY75O60449 1722 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 ARPC4-TTLL3A0A0A6YYG9 625 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 ZNF716A6NP11 495 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 IL11P20809 199 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 AESQ08117 197 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 XAF1Q6GPH4 301 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 FAM214BQ7L5A3 538 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 OR5A2Q8NGI9 324 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 ZDHHC11Q9H8X9 412 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 TRBV23-1A0A0A0MS06 115 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 TRAV39A0A0B4J263 110 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 ADAM10O14672 748 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 FAM162BQ5T6X4 162 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 LIAT1Q6ZQX7 453 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 CCL27Q9Y4X3 112 aa11.94□□□□□ -0.5
GPC6-201ENST00000377047 TCAPO15273 167 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 COL10A1Q03692 680 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 C11orf42Q8N5U0 333 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 OR10A7Q8NGE5 316 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 MMP7P09237 267 aaPredicted RBP11.93□□□□□ -0.5
GPC6-201ENST00000377047 HTN1P15515 57 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 MIDNQ504T8 468 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 ANXA10Q9UJ72 324 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 LIPGQ9Y5X9 500 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 FOSL1P15407 271 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 SLC23A3Q6PIS1 610 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 ZCCHC14Q8WYQ9 949 aaKnown RBP11.93□□□□□ -0.5
GPC6-201ENST00000377047 CENPVL1A0A0U1RR11 272 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 PRR33A8MZF0 331 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 AHRRA9YTQ3 701 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 ZNHIT1O43257 154 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 CSF2RBP32927 897 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 SSX8Q7RTT4 187 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 FLYWCH2Q96CP2 140 aaKnown RBP11.93□□□□□ -0.5
GPC6-201ENST00000377047 SH2D2AQ9NP31 389 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 IGKV1-8A0A0C4DH67 115 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms