RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 C5orf24Q7Z6I8 188 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 C17orf82Q86X59 251 aaPredicted RBP14.28□□□□□ -0.12
TRIM39-201ENST00000376656 CMTM1Q8IZ96 169 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 TMEM123Q8N131 208 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 NABP1Q96AH0 204 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 SNX22Q96L94 193 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 HIST1H2BLQ99880 126 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 EPOPA6NHQ4 379 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 IL2RGP31785 369 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 OTX1P32242 354 aaPredicted RBP14.28□□□□□ -0.12
TRIM39-201ENST00000376656 CD200P41217 278 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 TAS2R60P59551 318 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 DNLZQ5SXM8 178 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 ANKRD37Q7Z713 158 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 ZNF100Q8IYN0 542 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 C1orf87Q8N0U7 546 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 TMEM222Q9H0R3 208 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 PLEK2Q9NYT0 353 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 ADAM20O43506 726 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 TLX3O43711 291 aaPredicted RBP14.28□□□□□ -0.12
TRIM39-201ENST00000376656 OR2J2O76002 312 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 PPYP01298 95 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 ZNF154Q13106 437 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 RNF138Q8WVD3 245 aa14.28□□□□□ -0.12
TRIM39-201ENST00000376656 RAB11AP62491 216 aa14.27□□□□□ -0.12
TRIM39-201ENST00000376656 Q6ZS52 159 aa14.27□□□□□ -0.12
TRIM39-201ENST00000376656 C17orf78Q8N4C9 275 aa14.27□□□□□ -0.12
TRIM39-201ENST00000376656 GNPNAT1Q96EK6 184 aaPredicted RBP14.27□□□□□ -0.12
TRIM39-201ENST00000376656 RBM24Q9BX46 236 aaKnown RBP14.27□□□□□ -0.12
TRIM39-201ENST00000376656 GNG13Q9P2W3 67 aa14.27□□□□□ -0.12
TRIM39-201ENST00000376656 UBE2J1Q9Y385 318 aaPredicted RBP14.27□□□□□ -0.12
TRIM39-201ENST00000376656 LOC102723971A0A1B0GUV8 181 aa14.27□□□□□ -0.13
TRIM39-201ENST00000376656 PHOX2AO14813 284 aa14.27□□□□□ -0.13
TRIM39-201ENST00000376656 IFNA10P01566 189 aa14.27□□□□□ -0.13
TRIM39-201ENST00000376656 MSX1P28360 303 aa14.27□□□□□ -0.13
TRIM39-201ENST00000376656 FAM90A2PQ658T7 463 aa14.27□□□□□ -0.13
TRIM39-201ENST00000376656 ZNF695Q8IW36 515 aa14.27□□□□□ -0.13
TRIM39-201ENST00000376656 OR2M3Q8NG83 312 aa14.27□□□□□ -0.13
TRIM39-201ENST00000376656 SPSB1Q96BD6 273 aa14.27□□□□□ -0.13
TRIM39-201ENST00000376656 C10orf35Q96D05 121 aa14.27□□□□□ -0.13
TRIM39-201ENST00000376656 RBMXL1Q96E39 390 aaKnown RBP14.27□□□□□ -0.13
TRIM39-201ENST00000376656 SSX3Q99909 188 aa14.27□□□□□ -0.13
TRIM39-201ENST00000376656 CRLF2Q9HC73 371 aa14.27□□□□□ -0.13
TRIM39-201ENST00000376656 ASCC3Q8N3C0 2202 aaKnown RBP14.27□□□□□ -0.13
TRIM39-201ENST00000376656 TERTO14746 1132 aaKnown RBP14.26□□□□□ -0.13
TRIM39-201ENST00000376656 HYAL1Q12794 435 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 TBC1D26Q86UD7 250 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 BATF2Q8N1L9 274 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 MISP3Q96FF7 219 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 ZNF385AQ96PM9 386 aaKnown RBP14.26□□□□□ -0.13
TRIM39-201ENST00000376656 IGHV3-15A0A0B4J1V0 119 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 GNRHRP30968 328 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 TLE4Q04727 773 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 SELENOHQ8IZQ5 122 aaKnown RBP14.26□□□□□ -0.13
TRIM39-201ENST00000376656 ST3GAL6Q9Y274 331 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 SMCO3A2RU48 225 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 MYF5P13349 255 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 CD81P60033 236 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 DLX2Q07687 328 aaPredicted RBP14.26□□□□□ -0.13
TRIM39-201ENST00000376656 ZNF124Q15973 351 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 OSR2Q8N2R0 312 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 NAT6Q93015 286 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 ZNF837Q96EG3 531 aaPredicted RBP14.26□□□□□ -0.13
TRIM39-201ENST00000376656 FGF21Q9NSA1 209 aa14.26□□□□□ -0.13
TRIM39-201ENST00000376656 IGHV1OR21-1A0A087WYE8 117 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 HIST1H3AP68431 136 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 SHBQ15464 509 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 SPIN3Q5JUX0 258 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 BORCS8Q96FH0 119 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 ARGFXA6NJG6 315 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 B4DEV8 164 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 IGLV3-19P01714 112 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 HBE1P02100 147 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 RND2P52198 227 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 ZNF385CQ66K41 422 aaPredicted RBP14.25□□□□□ -0.13
TRIM39-201ENST00000376656 ZNF880Q6PDB4 577 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 IL22RA1Q8N6P7 574 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 RNASE11Q8TAA1 199 aaKnown RBP14.25□□□□□ -0.13
TRIM39-201ENST00000376656 SIGLEC12Q96PQ1 595 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 TPSD1Q9BZJ3 242 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 ZFP92A6NM28 416 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 CLDN34H7C241 214 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 ZFP36L1Q07352 338 aaKnown RBP14.25□□□□□ -0.13
TRIM39-201ENST00000376656 MPV17LQ2QL34 196 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 C10orf128Q5T292 105 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 SPTSSAQ969W0 71 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 ZNF501Q96CX3 271 aaPredicted RBP14.25□□□□□ -0.13
TRIM39-201ENST00000376656 RCC1LQ96I51 464 aaKnown RBP14.25□□□□□ -0.13
TRIM39-201ENST00000376656 TMEM56Q96MV1 263 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 CDCA3Q99618 268 aaPredicted RBP14.25□□□□□ -0.13
TRIM39-201ENST00000376656 SLC7A10Q9NS82 523 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 TMEM56-RWDD3S4R434 201 aa14.25□□□□□ -0.13
TRIM39-201ENST00000376656 EML6Q6ZMW3 1958 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 A0A1B0GU03 582 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 C9J4A7 227 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 CHST1O43916 411 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 CEACAM1P13688 526 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 PAX1P15863 534 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 SRPXP78539 464 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 SPIN2AQ99865 258 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms