RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 PRPS1L1P21108 318 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 TSPOP30536 169 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 OR2B6P58173 313 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 HBG1P69891 147 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 HBG2P69892 147 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 CD164Q04900 197 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 BAXQ07812 192 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 BIKQ13323 160 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 CEACAM21Q3KPI0 293 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 MRPL2Q5T653 305 aaKnown RBP1.04□□□□□ -2.24
VPS13A-206ENST00000376646 NXNL2Q5VZ03 156 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 GLYATQ6IB77 296 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 ADM2Q7Z4H4 148 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 MARCH3Q86UD3 253 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 OR2M3Q8NG83 312 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 OR8A1Q8NGG7 326 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 OTUB2Q96DC9 234 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 BIRC8Q96P09 236 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 SERPINB11Q96P15 392 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 PITX2Q99697 317 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 TAPBPLQ9BX59 468 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 MFSD1Q9H3U5 465 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 TRIM45Q9H8W5 580 aaPredicted RBP1.04□□□□□ -2.24
VPS13A-206ENST00000376646 CHMP5Q9NZZ3 219 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 CRCT1Q9UGL9 99 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 SNX24Q9Y343 169 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 USP24Q9UPU5 2620 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 IGKV2-24A0A0C4DH68 120 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 GOLGA8IPA6NC78 632 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 GMNCA6NCL1 334 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 GOLGA6L4A6NEF3 574 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 H3BQ85 93 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 K7ERS5 55 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 SULT1C2O00338 296 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 SGCEO43556 437 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 TNFAIP8O95379 198 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 INAFM2P0DMQ5 153 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 NQO2P16083 231 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 TGFBR2P37173 567 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 MAGEA6P43360 314 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 PRDX1Q06830 199 aaKnown RBP1.03□□□□□ -2.24
VPS13A-206ENST00000376646 XRCC4Q13426 336 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 ENDOGQ14249 297 aaKnown RBP1.03□□□□□ -2.24
VPS13A-206ENST00000376646 ZNF235Q14590 738 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 PDZD11Q5EBL8 140 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 ZNF660Q6AZW8 331 aaPredicted RBP1.03□□□□□ -2.24
VPS13A-206ENST00000376646 USP50Q70EL3 339 aaPredicted RBP1.03□□□□□ -2.24
VPS13A-206ENST00000376646 DPPA2Q7Z7J5 298 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 SYCE1Q8N0S2 351 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 ZFP82Q8N141 532 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 GATD1Q8NB37 220 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 YIPF5Q969M3 257 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 PGLYRP3Q96LB9 341 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 OLFM3Q96PB7 478 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 CYTH2Q99418 400 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 SUCNR1Q9BXA5 334 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 DSN1Q9H410 356 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 FBXL15Q9H469 300 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 ICOSQ9Y6W8 199 aa1.03□□□□□ -2.24
VPS13A-206ENST00000376646 IGHV3-43A0A0B4J1X8 118 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 LINC00854A0A1B0GVQ3 168 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 A0A1W2PNN7 141 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 A0A1W2PRG6 482 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 ZNF729A6NN14 1252 aaPredicted RBP1.03□□□□□ -2.25
VPS13A-206ENST00000376646 HSBP1L1C9JCN9 74 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 UBDO15205 165 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 PDCD6O75340 191 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 BRI3O95415 125 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 SNAP29O95721 258 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 FADS2O95864 444 aaKnown RBP1.03□□□□□ -2.25
VPS13A-206ENST00000376646 NPPAP01160 153 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 IGKV1D-33P01593 117 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 IGKV1-33P01594 117 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 IGHMP01871 453 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 SLC2A1P11166 492 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 PTHLHP12272 177 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 MLNP12872 115 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 GTF2F2P13984 249 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 HRES1P13985 223 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 SPNP16150 400 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 CD34P28906 385 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 ZNF83P51522 516 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 PLTPP55058 493 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 OR10A3P58181 314 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 FLOT2Q14254 428 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 ANGPT1Q15389 498 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 SLC9A3R2Q15599 337 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 OR10J3Q5JRS4 329 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 TMEM215Q68D42 235 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 ELP2Q6IA86 826 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 TMEM25Q86YD3 366 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 SELENOHQ8IZQ5 122 aaKnown RBP1.03□□□□□ -2.25
VPS13A-206ENST00000376646 ACTL9Q8TC94 416 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 MAL2Q969L2 176 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 GABARAPL1Q9H0R8 117 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 TXNIPQ9H3M7 391 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 DUSP21Q9H596 190 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 ZNF586Q9NXT0 402 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 TAS2R1Q9NYW7 299 aa1.03□□□□□ -2.25
VPS13A-206ENST00000376646 BTRCQ9Y297 605 aa1.03□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms