RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 FOCADQ5VW36 1801 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 DOCK8Q8NF50 2099 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 PABPC1L2AQ5JQF8 200 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 NRSN2Q9GZP1 204 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 SS18L1O75177 396 aaPredicted RBP10.38□□□□□ -0.75
VPS13A-205ENST00000376636 GJB3O75712 270 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 COL19A1Q14993 1142 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 SLC25A35Q3KQZ1 300 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 SLC52A3Q9NQ40 469 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 PWWP2BQ6NUJ5 590 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 WDFY1Q8IWB7 410 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 MKRN2OSH3BPM6 223 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 ALKBH6Q3KRA9 238 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 ZNF683Q8IZ20 524 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 WDFY2Q96P53 400 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 BCL2L10Q9HD36 194 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 HYAL1Q12794 435 aa10.38□□□□□ -0.75
VPS13A-205ENST00000376636 TRAF4Q9BUZ4 470 aaPredicted RBP10.38□□□□□ -0.75
VPS13A-205ENST00000376636 FAM157CP0CG43 387 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 CD27P26842 260 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 NPBWR2P48146 333 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 FAM78AQ5JUQ0 283 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 MTFP1Q9UDX5 166 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.37□□□□□ -0.75
VPS13A-205ENST00000376636 HINT1P49773 126 aaPredicted RBP10.37□□□□□ -0.75
VPS13A-205ENST00000376636 TCL1AP56279 114 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 CA13Q8N1Q1 262 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 NSUN5P2Q63ZY6 315 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 LOC389332A0A1B0GUA5 103 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 CTAG2O75638 210 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 IL4P05112 153 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 ST3GAL2Q16842 350 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 RLN3Q8WXF3 142 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 TEX37Q96LM6 180 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 ALKBH3Q96Q83 286 aaPredicted RBP10.37□□□□□ -0.75
VPS13A-205ENST00000376636 CEP290O15078 2479 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 OR4A8P0C604 315 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 MAS1LP35410 378 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 ZNF750Q32MQ0 723 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 FAHD1Q6P587 224 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 MRPL43Q8N983 215 aaKnown RBP10.37□□□□□ -0.75
VPS13A-205ENST00000376636 OR2V2Q96R30 315 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 SPAG8Q99932 426 aaPredicted RBP10.37□□□□□ -0.75
VPS13A-205ENST00000376636 A0A1W2PNR3 127 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 ARG1P05089 322 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 MRPL54Q6P161 138 aaKnown RBP10.37□□□□□ -0.75
VPS13A-205ENST00000376636 SLC37A2Q8TED4 501 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 ST6GAL1P15907 406 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 FAM53BQ14153 422 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 KCNAB1Q14722 419 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 LGALSLQ3ZCW2 172 aaPredicted RBP10.37□□□□□ -0.75
VPS13A-205ENST00000376636 TMEM108Q6UXF1 575 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 OR4P4Q8NGL7 312 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 LTBP3Q9NS15 1303 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 TNXAQ16473 311 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 MED29Q9NX70 200 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 PCP4P48539 62 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 RAB32Q13637 225 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 FBXL6Q8N531 539 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 LRRC75AQ8NAA5 344 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 OR2V1Q8NHB1 315 aa10.37□□□□□ -0.75
VPS13A-205ENST00000376636 ZNF646O15015 1829 aaPredicted RBP10.36□□□□□ -0.75
VPS13A-205ENST00000376636 IGKV6-21A0A0C4DH24 114 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 F2RL2O00254 374 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 HBZP02008 142 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 FGF9P31371 208 aaPredicted RBP10.36□□□□□ -0.75
VPS13A-205ENST00000376636 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
VPS13A-205ENST00000376636 TEPPQ6URK8 271 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 MARVELD1Q9BSK0 173 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 CDC14BO60729 498 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 NTHL1P78549 312 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 PLPP2O43688 288 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 PPP1R17O96001 155 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 COL9A3Q14050 684 aaPredicted RBP10.36□□□□□ -0.75
VPS13A-205ENST00000376636 C20orf27Q9GZN8 174 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 B9D1Q9UPM9 204 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 AUP1Q9Y679 476 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 DEFB108AA8MXU0 73 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 OR8B3Q8NGG8 313 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 KCNMB2Q9Y691 235 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 IGHV3-15A0A0B4J1V0 119 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 SLC25A1P53007 311 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 VN1R2Q8NFZ6 395 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 C16orf52Q8NHV5 167 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 GMPPAQ96IJ6 420 aaPredicted RBP10.36□□□□□ -0.75
VPS13A-205ENST00000376636 NEURL2Q9BR09 285 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 POLEQ07864 2286 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 HLA-DQA1P01909 254 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 GUCA2AQ02747 115 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 ASCL3Q9NQ33 180 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 JKAMPQ9P055 326 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 A0A1W2PR48 441 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 H3BQ15 152 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 UBALD2Q8IYN6 164 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 PRNDQ9UKY0 176 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.36□□□□□ -0.75
VPS13A-205ENST00000376636 MPDZO75970 2070 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 TOPAZ1Q8N9V7 1692 aa10.36□□□□□ -0.75
VPS13A-205ENST00000376636 A0A087WUJ7 227 aa10.35□□□□□ -0.75
VPS13A-205ENST00000376636 TRDCB7Z8K6 153 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms