RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 ING3Q9NXR8 418 aa11.88□□□□□ -0.51
CLCN6-204ENST00000376491 AP4S1Q9Y587 144 aa11.88□□□□□ -0.51
CLCN6-204ENST00000376491 ODAMA1E959 279 aa11.87□□□□□ -0.51
CLCN6-204ENST00000376491 J3QRE1 110 aa11.87□□□□□ -0.51
CLCN6-204ENST00000376491 SLC33A1O00400 549 aaPredicted RBP11.87□□□□□ -0.51
CLCN6-204ENST00000376491 CSN2P05814 226 aa11.87□□□□□ -0.51
CLCN6-204ENST00000376491 ZNF44P15621 663 aa11.87□□□□□ -0.51
CLCN6-204ENST00000376491 ZNF20P17024 532 aa11.87□□□□□ -0.51
CLCN6-204ENST00000376491 SCN1BQ07699 218 aa11.87□□□□□ -0.51
CLCN6-204ENST00000376491 KPNB1Q14974 876 aaKnown RBP11.87□□□□□ -0.51
CLCN6-204ENST00000376491 OR4X2Q8NGF9 303 aa11.87□□□□□ -0.51
CLCN6-204ENST00000376491 CAPSLQ8WWF8 208 aa11.87□□□□□ -0.51
CLCN6-204ENST00000376491 OSBPL10Q9BXB5 764 aa11.87□□□□□ -0.51
CLCN6-204ENST00000376491 PPIL3Q9H2H8 161 aaKnown RBP11.87□□□□□ -0.51
CLCN6-204ENST00000376491 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.87□□□□□ -0.51
CLCN6-204ENST00000376491 FUOMA2VDF0 154 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 FAM90A18PA6NE21 464 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 FAM90A16PA6NEW6 464 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 FAM90A20PA6NIJ5 464 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 FAM90A9PA6NNJ1 464 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 FAM90A12PA8MX19 464 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 FAM90A5PA8MXJ8 464 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 MT-ND2P03891 347 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 FAM90A15PP0C7V4 464 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 FAM90A13PP0C7W8 464 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 FAM90A14PP0C7W9 464 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 FAM90A24PP0C7X0 464 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 CGB3P0DN86 165 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 CGB7P0DN87 165 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 HOXD3P31249 432 aaPredicted RBP11.86□□□□□ -0.51
CLCN6-204ENST00000376491 PTGFRP43088 359 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 OR3A4PP47883 348 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 EGFEM1PQ0D2K5 195 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 BNIP1Q12981 228 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 CDK5R1Q15078 307 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 KHDC1LQ5JSQ8 128 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 C9orf152Q5JTZ5 239 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 KRBOX4Q5JUW0 171 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 ETV3LQ6ZN32 361 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 OSR2Q8N2R0 312 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 LINC00482Q8N8I6 264 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 OR13C9Q8NGT0 318 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 RFKQ969G6 155 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 OAZ3Q9UMX2 235 aa11.86□□□□□ -0.51
CLCN6-204ENST00000376491 COL7A1Q02388 2944 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 OR4C45A6NMZ5 311 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 ZNF729A6NN14 1252 aaPredicted RBP11.85□□□□□ -0.51
CLCN6-204ENST00000376491 TOR1AO14656 332 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 DUS4LO95620 317 aaKnown RBP11.85□□□□□ -0.51
CLCN6-204ENST00000376491 HTR1AP08908 422 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 CEACAM3P40198 252 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 ARHGDIBP52566 201 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 PRRX1P54821 245 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 ZP1P60852 638 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 RBM39Q14498 530 aaKnown RBP11.85□□□□□ -0.51
CLCN6-204ENST00000376491 ATXN7L3Q14CW9 347 aaPredicted RBP11.85□□□□□ -0.51
CLCN6-204ENST00000376491 DEFB121Q5J5C9 76 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 KCTD20Q7Z5Y7 419 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 ZNF329Q86UD4 541 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 SAXO1Q8IYX7 474 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 OR4D6Q8NGJ1 314 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 OR13C3Q8NGS6 347 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 CREB3L1Q96BA8 519 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 RNFT2Q96EX2 444 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 PELI1Q96FA3 418 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 KIRREL1Q96J84 757 aa11.85□□□□□ -0.51
CLCN6-204ENST00000376491 KBTBD11-OT1A0A1B0GTJ5 212 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 DAPL1A0PJW8 107 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 SAC3D1A6NKF1 404 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 OOSP1A8MZH6 123 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 M0QZK8 103 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 DEGS1O15121 323 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 SLC16A6O15403 523 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 OCM2P0CE71 109 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 OCMP0CE72 109 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-204ENST00000376491 FCGR1AP12314 374 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 NFYBP25208 207 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 CCR9P51686 369 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 DIAPH2-AS1Q14236 149 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 C18orf65Q6ZTR6 163 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 MRPL41Q8IXM3 137 aaKnown RBP11.84□□□□□ -0.51
CLCN6-204ENST00000376491 CHST4Q8NCG5 386 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 OR9G1Q8NH87 305 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 CENPNQ96H22 339 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-204ENST00000376491 ZCCHC4Q9H5U6 513 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 RHOFQ9HBH0 211 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 NEK6Q9HC98 313 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 MYRFQ9Y2G1 1151 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 MOB4Q9Y3A3 225 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 PCDHGB5Q9Y5G0 923 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 HSPE1-MOB4S4R3N1 261 aa11.84□□□□□ -0.51
CLCN6-204ENST00000376491 PSMB11A5LHX3 300 aa11.83□□□□□ -0.52
CLCN6-204ENST00000376491 J3QLW9 94 aa11.83□□□□□ -0.52
CLCN6-204ENST00000376491 IGHV3-7P01780 117 aa11.83□□□□□ -0.52
CLCN6-204ENST00000376491 SNRNP70P08621 437 aaKnown RBP11.83□□□□□ -0.52
CLCN6-204ENST00000376491 ZNF19P17023 458 aa11.83□□□□□ -0.52
CLCN6-204ENST00000376491 MNDAP41218 407 aa11.83□□□□□ -0.52
CLCN6-204ENST00000376491 ALKBH1Q13686 389 aaKnown RBP11.83□□□□□ -0.52
CLCN6-204ENST00000376491 C1orf146Q5VVC0 180 aa11.83□□□□□ -0.52
CLCN6-204ENST00000376491 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms