RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 TRUB1Q8WWH5 349 aaKnown RBP18.49■□□□□ 0.55
C9orf47-202ENST00000375850 FGGYQ96C11 551 aa18.49■□□□□ 0.55
C9orf47-202ENST00000375850 MYCBPQ99417 103 aaPredicted RBP18.49■□□□□ 0.55
C9orf47-202ENST00000375850 OSBPL10Q9BXB5 764 aa18.49■□□□□ 0.55
C9orf47-202ENST00000375850 E9PQ18 207 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 ZNF44P15621 663 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 SLC6A1P30531 599 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 GLIPR1P48060 266 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 CCR9P51686 369 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 ZNF85Q03923 595 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 AESQ08117 197 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 EGFEM1PQ0D2K5 195 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 TP53I3Q53FA7 332 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 KHDC1LQ5JSQ8 128 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 EME1Q96AY2 570 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 ZNF286AQ9HBT8 521 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 INPP5EQ9NRR6 644 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 ZMAT5Q9UDW3 170 aaKnown RBP18.48■□□□□ 0.55
C9orf47-202ENST00000375850 MOB4Q9Y3A3 225 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 AMMECR1Q9Y4X0 333 aaPredicted RBP18.48■□□□□ 0.55
C9orf47-202ENST00000375850 AP4S1Q9Y587 144 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 HSPE1-MOB4S4R3N1 261 aa18.48■□□□□ 0.55
C9orf47-202ENST00000375850 LY6LH3BQJ8 138 aa18.47■□□□□ 0.55
C9orf47-202ENST00000375850 AMY1AP04745 511 aa18.47■□□□□ 0.55
C9orf47-202ENST00000375850 AMY2AP04746 511 aa18.47■□□□□ 0.55
C9orf47-202ENST00000375850 KRBOX4Q5JUW0 171 aa18.47■□□□□ 0.55
C9orf47-202ENST00000375850 OR9G1Q8NH87 305 aa18.47■□□□□ 0.55
C9orf47-202ENST00000375850 MCRIP2Q9BUT9 160 aaKnown RBP18.47■□□□□ 0.55
C9orf47-202ENST00000375850 DNAH3Q8TD57 4116 aa18.47■□□□□ 0.55
C9orf47-202ENST00000375850 CALCBP10092 127 aa18.46■□□□□ 0.55
C9orf47-202ENST00000375850 DBTP11182 482 aaKnown RBP18.46■□□□□ 0.55
C9orf47-202ENST00000375850 LINC00482Q8N8I6 264 aa18.46■□□□□ 0.55
C9orf47-202ENST00000375850 RNF166Q96A37 237 aaPredicted RBP18.46■□□□□ 0.55
C9orf47-202ENST00000375850 MRPL48Q96GC5 212 aaKnown RBP18.46■□□□□ 0.55
C9orf47-202ENST00000375850 NCOR1P1Q9H4R4 102 aa18.46■□□□□ 0.55
C9orf47-202ENST00000375850 FRRS1LQ9P0K9 344 aa18.46■□□□□ 0.55
C9orf47-202ENST00000375850 IGKV1-12A0A0C4DH73 117 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 KBTBD11-OT1A0A1B0GTJ5 212 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 PSMB11A5LHX3 300 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 SLC16A6O15403 523 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 IGKV1D-12P01611 117 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 HTR1AP08908 422 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 DEFB121Q5J5C9 76 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 C9orf152Q5JTZ5 239 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 BAIAP2L2Q6UXY1 529 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 ZNF565Q8N9K5 539 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 OR13C3Q8NGS6 347 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 RPEQ96AT9 228 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 RIBC2Q9H4K1 309 aa18.45■□□□□ 0.54
C9orf47-202ENST00000375850 DAPL1A0PJW8 107 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 FAM90A18PA6NE21 464 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 FAM90A16PA6NEW6 464 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 FAM90A20PA6NIJ5 464 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 FAM90A9PA6NNJ1 464 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 FAM90A12PA8MX19 464 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 FAM90A5PA8MXJ8 464 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 SLC33A1O00400 549 aaPredicted RBP18.44■□□□□ 0.54
C9orf47-202ENST00000375850 DEGS1O15121 323 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 FAM90A15PP0C7V4 464 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 FAM90A13PP0C7W8 464 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 FAM90A14PP0C7W9 464 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 FAM90A24PP0C7X0 464 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 GDNFP39905 211 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 OR3A4PP47883 348 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 BNIP1Q12981 228 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 Q6P435 159 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 OR13C9Q8NGT0 318 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 BCAS4Q8TDM0 211 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 CHPT1Q8WUD6 406 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 TOMM40LQ969M1 308 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 RFT1Q96AA3 541 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 CPNE2Q96FN4 548 aaPredicted RBP18.44■□□□□ 0.54
C9orf47-202ENST00000375850 COQ2Q96H96 371 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 ZFP57Q9NU63 452 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 IMPAD1Q9NX62 359 aa18.44■□□□□ 0.54
C9orf47-202ENST00000375850 FAM172BPA6NC97 362 aa18.43■□□□□ 0.54
C9orf47-202ENST00000375850 SNTNA6NMZ2 147 aa18.43■□□□□ 0.54
C9orf47-202ENST00000375850 POLR2IP36954 125 aaKnown RBP18.43■□□□□ 0.54
C9orf47-202ENST00000375850 MTNR1BP49286 362 aa18.43■□□□□ 0.54
C9orf47-202ENST00000375850 RASSF2P50749 326 aa18.43■□□□□ 0.54
C9orf47-202ENST00000375850 SCN1BQ07699 218 aa18.43■□□□□ 0.54
C9orf47-202ENST00000375850 RBM39Q14498 530 aaKnown RBP18.43■□□□□ 0.54
C9orf47-202ENST00000375850 SLC25A30Q5SVS4 291 aa18.43■□□□□ 0.54
C9orf47-202ENST00000375850 MEDAGQ5VYS4 303 aa18.43■□□□□ 0.54
C9orf47-202ENST00000375850 AMIGO2Q86SJ2 522 aa18.43■□□□□ 0.54
C9orf47-202ENST00000375850 COMMD1Q8N668 190 aa18.43■□□□□ 0.54
C9orf47-202ENST00000375850 CENPNQ96H22 339 aaPredicted RBP18.43■□□□□ 0.54
C9orf47-202ENST00000375850 HRASLS5Q96KN8 279 aa18.43■□□□□ 0.54
C9orf47-202ENST00000375850 ZCCHC4Q9H5U6 513 aa18.43■□□□□ 0.54
C9orf47-202ENST00000375850 FGF16O43320 207 aa18.42■□□□□ 0.54
C9orf47-202ENST00000375850 C21orf33P30042 268 aaPredicted RBP18.42■□□□□ 0.54
C9orf47-202ENST00000375850 NANOS3P60323 173 aaKnown RBP18.42■□□□□ 0.54
C9orf47-202ENST00000375850 KRTAP10-11P60412 298 aa18.42■□□□□ 0.54
C9orf47-202ENST00000375850 C17orf58Q2M2W7 97 aa18.42■□□□□ 0.54
C9orf47-202ENST00000375850 SLC16A12Q6ZSM3 486 aa18.42■□□□□ 0.54
C9orf47-202ENST00000375850 MRPL41Q8IXM3 137 aaKnown RBP18.42■□□□□ 0.54
C9orf47-202ENST00000375850 OR51T1Q8NGJ9 327 aa18.42■□□□□ 0.54
C9orf47-202ENST00000375850 OR5D18Q8NGL1 313 aa18.42■□□□□ 0.54
C9orf47-202ENST00000375850 OR5D14Q8NGL3 314 aa18.42■□□□□ 0.54
C9orf47-202ENST00000375850 KIRREL1Q96J84 757 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms