RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 PPP1R35Q8TAP8 253 aa12.62□□□□□ -0.39
SDHB-201ENST00000375499 TNFAIP8L1Q8WVP5 186 aa12.62□□□□□ -0.39
SDHB-201ENST00000375499 SGCDQ92629 289 aa12.62□□□□□ -0.39
SDHB-201ENST00000375499 GHSRQ92847 366 aa12.62□□□□□ -0.39
SDHB-201ENST00000375499 FAM192AQ9GZU8 254 aa12.62□□□□□ -0.39
SDHB-201ENST00000375499 PPIL3Q9H2H8 161 aaKnown RBP12.62□□□□□ -0.39
SDHB-201ENST00000375499 DCLRE1BQ9H816 532 aa12.62□□□□□ -0.39
SDHB-201ENST00000375499 BEX1Q9HBH7 125 aa12.62□□□□□ -0.39
SDHB-201ENST00000375499 ING3Q9NXR8 418 aa12.62□□□□□ -0.39
SDHB-201ENST00000375499 CNOT2Q9NZN8 540 aaKnown RBP12.62□□□□□ -0.39
SDHB-201ENST00000375499 WNK1Q9H4A3 2382 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 VWFP04275 2813 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 TRAV8-7A0A075B6U6 113 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 hCG_1809904A0A1W2PP81 198 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 A0A1W2PPE2 198 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 A0A1W2PR64 198 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 A0A1W2PRV1 198 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 FAM172BPA6NC97 362 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 BTBD17A6NE02 478 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 EFCAB10A6NFE3 127 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 HSPB6O14558 160 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 CHST1O43916 411 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 CLPXO76031 633 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 CDRT1O95170 752 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 IGFBP3P17936 291 aaPredicted RBP12.61□□□□□ -0.39
SDHB-201ENST00000375499 MTNR1BP49286 362 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 PROK1P58294 105 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 ATXN7L3Q14CW9 347 aaPredicted RBP12.61□□□□□ -0.39
SDHB-201ENST00000375499 PIGYQ3MUY2 71 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 PRAMEF5Q5TYX0 476 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 ELP2Q6IA86 826 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 OR11H6Q8NGC7 330 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 OR5R1Q8NH85 324 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 NR1H4Q96RI1 486 aaPredicted RBP12.61□□□□□ -0.39
SDHB-201ENST00000375499 GPER1Q99527 375 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 PLCXD1Q9NUJ7 323 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 GLS2Q9UI32 602 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 RNF114Q9Y508 228 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 SESN1Q9Y6P5 492 aa12.61□□□□□ -0.39
SDHB-201ENST00000375499 NOTCH1P46531 2555 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 IGHV2-26A0A0B4J1V2 119 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 TRAV24A0A0B4J272 114 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 A0A1W2PP11 408 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 A0A1W2PPK0 400 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 H0YJX3 145 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 CSN2P05814 226 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 CD2P06729 351 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 SLC34A1Q06495 639 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 DDI2Q5TDH0 399 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 ASCL4Q6XD76 172 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 TRAPPC6BQ86SZ2 158 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 OR13D1Q8NGV5 346 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 OR14A2Q96R54 314 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 RHOFQ9HBH0 211 aa12.6□□□□□ -0.39
SDHB-201ENST00000375499 TRBV5-7A0A0A0MS05 114 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 ODAMA1E959 279 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 DEGS1O15121 323 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 PIN1P1O15428 100 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 TSPAN9O75954 239 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 ALDOBP05062 364 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 RAB13P51153 203 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 LGALS4P56470 323 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 Q499Y3 187 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 YIF1BQ5BJH7 314 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 CCBE1Q6UXH8 406 aaPredicted RBP12.59□□□□□ -0.39
SDHB-201ENST00000375499 STX19Q8N4C7 294 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 Q8NFD4 153 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 OR51T1Q8NGJ9 327 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 CITED1Q99966 193 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 C16orf95Q9H693 158 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 TMEM138Q9NPI0 162 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 PAK1IP1Q9NWT1 392 aaPredicted RBP12.59□□□□□ -0.39
SDHB-201ENST00000375499 CHCHD3Q9NX63 227 aaKnown RBP12.59□□□□□ -0.39
SDHB-201ENST00000375499 SIGLEC9Q9Y336 463 aa12.59□□□□□ -0.39
SDHB-201ENST00000375499 UBE2J1Q9Y385 318 aaPredicted RBP12.59□□□□□ -0.39
SDHB-201ENST00000375499 TBL2Q9Y4P3 447 aaKnown RBP12.59□□□□□ -0.39
SDHB-201ENST00000375499 ERICH4A6NGS2 130 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 MYL12BO14950 172 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 HTR3BO95264 441 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 FSTP19883 344 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 CDK2P24941 298 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 BDKRB2P30411 391 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 ZNF93P35789 620 aaPredicted RBP12.58□□□□□ -0.4
SDHB-201ENST00000375499 TGFBR2P37173 567 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 PTGFRP43088 359 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 WNT4P56705 351 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 PPP3R1P63098 170 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 DYNC1I2Q13409 638 aaKnown RBP12.58□□□□□ -0.4
SDHB-201ENST00000375499 MED21Q13503 144 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 RIPK1Q13546 671 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 IL13RA2Q14627 380 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 INSL4Q14641 139 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 SSX2Q16385 188 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 AANATQ16613 207 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 C17orf58Q2M2W7 97 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 KRBOX4Q5JUW0 171 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 SLC35E4Q6ICL7 350 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 BRICD5Q6PL45 260 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 NANOGP1Q8N7R0 232 aa12.58□□□□□ -0.4
SDHB-201ENST00000375499 CHST4Q8NCG5 386 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms