RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 DYRK2Q92630 601 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 CDC42EP2O14613 210 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 CEACAM5P06731 702 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 SELENOTP62341 195 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 GUCA2AQ02747 115 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 TEPPQ6URK8 271 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 PDPNQ86YL7 162 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 J3QW42 95 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 CNIH1O95406 144 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 LGALS4P56470 323 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 PUSL1Q8N0Z8 303 aaKnown RBP9.03□□□□□ -0.96
PTCH1-204ENST00000375290 FBXO4Q9UKT5 387 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 WIPI2Q9Y4P8 454 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 AMMECR1Q9Y4X0 333 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-204ENST00000375290 SOX21Q9Y651 276 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-204ENST00000375290 C5orf49A4QMS7 147 aa9.02□□□□□ -0.96
PTCH1-204ENST00000375290 FAHP16930 419 aa9.02□□□□□ -0.96
PTCH1-204ENST00000375290 LEMD1Q68G75 181 aa9.02□□□□□ -0.96
PTCH1-204ENST00000375290 PTPMT1Q8WUK0 201 aaPredicted RBP9.02□□□□□ -0.96
PTCH1-204ENST00000375290 ASB10Q8WXI3 467 aa9.02□□□□□ -0.96
PTCH1-204ENST00000375290 CDCP1Q9H5V8 836 aa9.02□□□□□ -0.96
PTCH1-204ENST00000375290 TMEM242Q9NWH2 141 aa9.02□□□□□ -0.96
PTCH1-204ENST00000375290 SMPD2O60906 423 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 PRKRAO75569 313 aaKnown RBP9.02□□□□□ -0.97
PTCH1-204ENST00000375290 SLC36A1Q7Z2H8 476 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 OR1P1Q8NH06 330 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 SFRP2Q96HF1 295 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 VN1R1Q9GZP7 353 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 CRYM-AS1A6NIL9 109 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 CNEP1R1Q8N9A8 125 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 HHIPQ96QV1 700 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 H0Y8G0 127 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 FOLR2P14207 255 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 LBX1P52954 281 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 PQLC2Q6ZP29 291 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 WFDC5Q8TCV5 224 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 SLC52A3Q9NQ40 469 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 HELTA6NFD8 242 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 RAC3P60763 192 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 FAM78BQ5VT40 261 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 ASCL5Q7RTU5 278 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 ING1Q9UK53 422 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-204ENST00000375290 GLIPR1P48060 266 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 RSG1Q9BU20 258 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 SFXN3Q9BWM7 321 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 TMEM222Q9H0R3 208 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 NPBWR2P48146 333 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 MYBPHQ13203 477 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 OR1C1Q15619 314 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 HIKESHIQ53FT3 197 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.02□□□□□ -0.97
PTCH1-204ENST00000375290 FBXL14Q8N1E6 418 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 DNAJA3Q96EY1 480 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 TPPP3Q9BW30 176 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 MTCH2Q9Y6C9 303 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 PRF1P14222 555 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 DYNLT3P51808 116 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 BHLHA9Q7RTU4 235 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 AQP3Q92482 292 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 SLC26A1Q9H2B4 701 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 PCOLCE2Q9UKZ9 415 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 KCNE3Q9Y6H6 103 aa9.02□□□□□ -0.97
PTCH1-204ENST00000375290 LMO7DNF2Z398 122 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 ACAA1P09110 424 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-204ENST00000375290 PI3P19957 117 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 RIPPLY2Q5TAB7 128 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 RNASEKQ6P5S7 137 aaKnown RBP9.01□□□□□ -0.97
PTCH1-204ENST00000375290 VSTM2LQ96N03 204 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 MMP17Q9ULZ9 603 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 GBF1Q92538 1859 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 HSPB6O14558 160 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 SCN2AQ99250 2005 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 GREB1LQ9C091 1923 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-204ENST00000375290 CD82P27701 267 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 RPL24P83731 157 aaKnown RBP9.01□□□□□ -0.97
PTCH1-204ENST00000375290 LINC01559Q495D7 138 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 TCRBV16S1A1N1A0A5B0 115 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 FAM87AP0C7U9 286 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 GAMTQ14353 236 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 KCNMB1Q16558 191 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 ZNF750Q32MQ0 723 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 CADM4Q8NFZ8 388 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 SMIM14Q96QK8 99 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 OR5AL1P0C617 328 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 ERGP11308 486 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 MICBQ29980 383 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 ZNF793Q6ZN11 406 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 A0A0U1RQS6 177 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 A0A1B0GW15 77 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 RUNX2Q13950 521 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 LURAP1LQ8IV03 231 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 TAF1LQ8IZX4 1826 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 AGFG1P52594 562 aaKnown RBP9.01□□□□□ -0.97
PTCH1-204ENST00000375290 C1QL4Q86Z23 238 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 BARX1Q9HBU1 254 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-204ENST00000375290 GPR132Q9UNW8 380 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 LRRC37AA6NMS7 1700 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 A0A0B4J293 547 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 SCGB1C2P0DMR2 95 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 CXCL2P19875 107 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms