RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 PURGQ9UJV8 347 aaKnown RBP16.66■□□□□ 0.26
HDAC1-201ENST00000373548 AMDHD2Q9Y303 409 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 HEATR1Q9H583 2144 aaKnown RBP16.66■□□□□ 0.26
HDAC1-201ENST00000373548 IGHV2OR16-5A0A0B4J2B6 119 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 MPTX1A8MV57 137 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 GLP1RP43220 463 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 ERVK11-1P61568 191 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 OR8G1Q15617 311 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 C5orf24Q7Z6I8 188 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 SGPP2Q8IWX5 399 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 MOB3AQ96BX8 217 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 NMES1Q9C002 83 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 RHOFQ9HBH0 211 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 TNFSF18Q9UNG2 199 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 MAB21L2Q9Y586 359 aa16.66■□□□□ 0.26
HDAC1-201ENST00000373548 RP2O75695 350 aa16.65■□□□□ 0.26
HDAC1-201ENST00000373548 AP2S1P53680 142 aaPredicted RBP16.65■□□□□ 0.26
HDAC1-201ENST00000373548 PIGPP57054 158 aa16.65■□□□□ 0.26
HDAC1-201ENST00000373548 UNQ6126/PRO20091Q6UXV3 157 aa16.65■□□□□ 0.26
HDAC1-201ENST00000373548 FAM169BQ8N8A8 192 aa16.65■□□□□ 0.26
HDAC1-201ENST00000373548 OR8G5Q8NG78 346 aa16.65■□□□□ 0.26
HDAC1-201ENST00000373548 RDH5Q92781 318 aa16.65■□□□□ 0.26
HDAC1-201ENST00000373548 IFT22Q9H7X7 185 aa16.65■□□□□ 0.26
HDAC1-201ENST00000373548 TINAGQ9UJW2 476 aa16.65■□□□□ 0.26
HDAC1-201ENST00000373548 POLDIP2Q9Y2S7 368 aa16.65■□□□□ 0.26
HDAC1-201ENST00000373548 DSPP15924 2871 aaKnown RBP16.65■□□□□ 0.26
HDAC1-201ENST00000373548 IGHV3-64DA0A0J9YX35 117 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 TEX13DA0A0J9YY54 714 aaPredicted RBP16.64■□□□□ 0.25
HDAC1-201ENST00000373548 HS3ST1O14792 307 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 MLNRO43193 412 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 AADACP22760 399 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 Q6P435 159 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 GTF3AQ92664 365 aaKnown RBP16.64■□□□□ 0.25
HDAC1-201ENST00000373548 BCL2L14Q9BZR8 327 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 RPS10-NUDT3A0A1W2PQS6 291 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 CDIPTO14735 213 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 TUBG1P23258 451 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 RBMXP38159 391 aaKnown RBP16.64■□□□□ 0.25
HDAC1-201ENST00000373548 CYCSP99999 105 aaKnown RBP16.64■□□□□ 0.25
HDAC1-201ENST00000373548 ATXN7L3Q14CW9 347 aaPredicted RBP16.64■□□□□ 0.25
HDAC1-201ENST00000373548 C6orf183Q5T699 404 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 MRPL30Q8TCC3 161 aaKnown RBP16.64■□□□□ 0.25
HDAC1-201ENST00000373548 PIK3IP1Q96FE7 263 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 NRIP2Q9BQI9 281 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 TUBG2Q9NRH3 451 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 TMEM100Q9NV29 134 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 MBD2Q9UBB5 411 aa16.64■□□□□ 0.25
HDAC1-201ENST00000373548 ANKRD34BA5PLL1 514 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 TMEM210A6NLX4 147 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 GLAP06280 429 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 SCTP09683 121 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 PGA5P0DJD9 388 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 PSMB6P28072 239 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 CEACAM8P31997 349 aaPredicted RBP16.63■□□□□ 0.25
HDAC1-201ENST00000373548 UCP3P55916 312 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 Q8IYB0 196 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 THAP6Q8TBB0 222 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 OR10C1Q96KK4 312 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 METTL8Q9H825 291 aaKnown RBP16.63■□□□□ 0.25
HDAC1-201ENST00000373548 FZR1Q9UM11 496 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 RNF222A6NCQ9 220 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 DEGS1O15121 323 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 PPYP01298 95 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 GRPP07492 148 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 KITLGP21583 273 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 HERV-K104P61576 105 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 ZNF345Q14585 488 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 HERPUD1Q15011 391 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 TBR1Q16650 682 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 ABCA11PQ4W5N1 156 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 C20orf204Q6ZNR8 217 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 KCNRGQ8N5I3 272 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 S100PBPQ96BU1 408 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 RIMS4Q9H426 269 aaPredicted RBP16.63■□□□□ 0.25
HDAC1-201ENST00000373548 C1orf123Q9NWV4 160 aa16.63■□□□□ 0.25
HDAC1-201ENST00000373548 A0A0D9SG52 128 aa16.62■□□□□ 0.25
HDAC1-201ENST00000373548 TRDCB7Z8K6 153 aa16.62■□□□□ 0.25
HDAC1-201ENST00000373548 HOXB5P09067 269 aa16.62■□□□□ 0.25
HDAC1-201ENST00000373548 ZNF44P15621 663 aa16.62■□□□□ 0.25
HDAC1-201ENST00000373548 FABP6P51161 128 aa16.62■□□□□ 0.25
HDAC1-201ENST00000373548 RBM39Q14498 530 aaKnown RBP16.62■□□□□ 0.25
HDAC1-201ENST00000373548 Q8NA96 180 aa16.62■□□□□ 0.25
HDAC1-201ENST00000373548 OR5T2Q8NGG2 359 aa16.62■□□□□ 0.25
HDAC1-201ENST00000373548 PCNPQ8WW12 178 aaKnown RBP16.62■□□□□ 0.25
HDAC1-201ENST00000373548 RTN4IP1Q8WWV3 396 aaPredicted RBP16.62■□□□□ 0.25
HDAC1-201ENST00000373548 SFXN3Q9BWM7 321 aa16.62■□□□□ 0.25
HDAC1-201ENST00000373548 NAA60Q9H7X0 242 aa16.62■□□□□ 0.25
HDAC1-201ENST00000373548 SLC2A9Q9NRM0 540 aa16.62■□□□□ 0.25
HDAC1-201ENST00000373548 ATP23Q9Y6H3 246 aa16.62■□□□□ 0.25
HDAC1-201ENST00000373548 TRBV6-6A0A0A6YYG2 114 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 KIR2DS1A0A191URI9 304 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 K7ENP7 123 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 TIMM8AO60220 97 aaPredicted RBP16.61■□□□□ 0.25
HDAC1-201ENST00000373548 OR2F2O95006 317 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 GLI4P10075 376 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 KIR2DS4P43632 304 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 TDGF1P3P51864 188 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 NAAAQ02083 359 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 OR2F1Q13607 317 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 KIR2DS1Q14954 304 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms