RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 PPA2Q9H2U2 334 aa22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 ETAA1Q9NY74 926 aa22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 CFAP46Q8IYW2 2715 aa22.19■■□□□ 1.14
ATPAF1-202ENST00000371937 C17orf100A8MU93 164 aa22.18■■□□□ 1.14
ATPAF1-202ENST00000371937 SRRM5B3KS81 715 aa22.18■■□□□ 1.14
ATPAF1-202ENST00000371937 HAND1O96004 215 aa22.18■■□□□ 1.14
ATPAF1-202ENST00000371937 NAPSAO96009 420 aa22.18■■□□□ 1.14
ATPAF1-202ENST00000371937 RLN1P04808 185 aa22.18■■□□□ 1.14
ATPAF1-202ENST00000371937 GRK1Q15835 563 aa22.18■■□□□ 1.14
ATPAF1-202ENST00000371937 PAN3Q58A45 887 aaKnown RBP22.18■■□□□ 1.14
ATPAF1-202ENST00000371937 OVCH2Q7RTZ1 564 aa22.18■■□□□ 1.14
ATPAF1-202ENST00000371937 MOGAT3Q86VF5 341 aa22.18■■□□□ 1.14
ATPAF1-202ENST00000371937 OR13C8Q8NGS7 320 aa22.18■■□□□ 1.14
ATPAF1-202ENST00000371937 EHFQ9NZC4 300 aa22.18■■□□□ 1.14
ATPAF1-202ENST00000371937 IGKV1D-8A0A087WSZ0 117 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 SLC33A1O00400 549 aaPredicted RBP22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 MDH2P40926 338 aaKnown RBP22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 CDK10Q15131 360 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 FAM90A1Q86YD7 464 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 TERB2Q8NHR7 220 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 GHITMQ9H3K2 345 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 TREM2Q9NZC2 230 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 OR14J1Q9UGF5 321 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 ICE1Q9Y2F5 2266 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 B8ZZF3 427 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 SIRPB1O00241 398 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 CD55P08174 381 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 METTL11BQ5VVY1 283 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 SHEQ5VZ18 495 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 Q6ZS49 121 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 MED30Q96HR3 178 aa22.17■■□□□ 1.14
ATPAF1-202ENST00000371937 POM121CA8CG34 1229 aa22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 TNFRSF1AP19438 455 aa22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 EFNB3Q15768 340 aa22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 SPRNQ5BIV9 151 aa22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 NEUROG1Q92886 237 aa22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 HPS1Q92902 700 aa22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 DACT3Q96B18 629 aaPredicted RBP22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 BEX2Q9BXY8 128 aa22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 BEX1Q9HBH7 125 aa22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 GCM1Q9NP62 436 aa22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 NECAP2Q9NVZ3 263 aa22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 CISD1Q9NZ45 108 aaKnown RBP22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 HCFC1P51610 2035 aa22.16■■□□□ 1.14
ATPAF1-202ENST00000371937 TMEM82A0PJX8 343 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 DEFB108AA8MXU0 73 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 H7C1Q1 480 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 IFNL4K9M1U5 179 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 SIAH2O43255 324 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 IL5P05113 134 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 HNRNPCP07910 306 aaKnown RBP eCLIP22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 ANXA7P20073 488 aaKnown RBP22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 LMO1P25800 156 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 ZDHHC22Q8N966 263 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 ALX4Q9H161 411 aaPredicted RBP22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 NPTNQ9Y639 398 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 TRBV6-6A0A0A6YYG2 114 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 B9A039 149 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 CBX3Q13185 183 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 TESK1Q15569 626 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 FAM209AQ5JX71 171 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 GLDNQ6ZMI3 551 aaPredicted RBP22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 Q8TCH9 128 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 PIK3IP1Q96FE7 263 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 TMEM204Q9BSN7 226 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 EGLN1Q9GZT9 426 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 OR51J1Q9H342 316 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 GPN1Q9HCN4 374 aaPredicted RBP22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 Q9N2K0 584 aa22.15■■□□□ 1.14
ATPAF1-202ENST00000371937 SMG1Q96Q15 3661 aaKnown RBP22.14■■□□□ 1.14
ATPAF1-202ENST00000371937 CHD3Q12873 2000 aaKnown RBP22.14■■□□□ 1.14
ATPAF1-202ENST00000371937 SDCBPO00560 298 aaPredicted RBP22.14■■□□□ 1.13
ATPAF1-202ENST00000371937 CCNKO75909 580 aa22.14■■□□□ 1.13
ATPAF1-202ENST00000371937 LHBP01229 141 aa22.14■■□□□ 1.13
ATPAF1-202ENST00000371937 RRAS2P62070 204 aaPredicted RBP22.14■■□□□ 1.13
ATPAF1-202ENST00000371937 GCSAMQ8N6F7 178 aa22.14■■□□□ 1.13
ATPAF1-202ENST00000371937 OR11L1Q8NGX0 322 aa22.14■■□□□ 1.13
ATPAF1-202ENST00000371937 CCDC107Q8WV48 283 aa22.14■■□□□ 1.13
ATPAF1-202ENST00000371937 DHRS9Q9BPW9 319 aa22.14■■□□□ 1.13
ATPAF1-202ENST00000371937 MS4A5Q9H3V2 200 aa22.14■■□□□ 1.13
ATPAF1-202ENST00000371937 TMEM165Q9HC07 324 aa22.14■■□□□ 1.13
ATPAF1-202ENST00000371937 RNF7Q9UBF6 113 aa22.14■■□□□ 1.13
ATPAF1-202ENST00000371937 OR2AT4A6NND4 320 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 PLAUP00749 431 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 ZNF672Q499Z4 452 aaPredicted RBP22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 OR6F1Q8NGZ6 308 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 SEBOXQ9HB31 216 aaPredicted RBP22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 DNAJB11Q9UBS4 358 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 KIR2DS1A0A191URI9 304 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 RFPL4AA6NLU0 287 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 RFPL4AL1F8VTS6 287 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 OR5H8P0DN80 308 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 KIR2DS4P43632 304 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 KIR2DS1Q14954 304 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 ATPAF1Q5TC12 328 aaPredicted RBP22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 Q6ZPA2 131 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 MRGPRFQ96AM1 343 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 SCGB3A2Q96PL1 93 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 MED28Q9H204 178 aa22.13■■□□□ 1.13
ATPAF1-202ENST00000371937 DYNLRB1Q9NP97 96 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms