RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 TMEM207Q6UWW9 146 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 C20orf196Q8IYI0 205 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 OXGR1Q96P68 337 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 HTR3DQ70Z44 454 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 OR2V2Q96R30 315 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 LAT2Q9GZY6 243 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 IGHV3-64DA0A0J9YX35 117 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 MMP9P14780 707 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 MYBPHQ13203 477 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 DCAF12Q5T6F0 453 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 OR2Y1Q8NGV0 311 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 BCL2L10Q9HD36 194 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 MRPL16Q9NX20 251 aaKnown RBP13.62□□□□□ -0.23
COL5A1-201ENST00000371817 IL36GQ9NZH8 169 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 MRPS16Q9Y3D3 137 aaKnown RBP13.62□□□□□ -0.23
COL5A1-201ENST00000371817 TWIST1Q15672 202 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 V9GYH0 126 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 ZFPL1O95159 310 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 LIPFP07098 398 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 SEC11BP0C7V7 166 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 RRADP55042 308 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 ZNF418Q8TF45 676 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-201ENST00000371817 LYZL6O75951 148 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 RBPMS2Q6ZRY4 209 aaKnown RBP13.62□□□□□ -0.23
COL5A1-201ENST00000371817 TRMT61AQ96FX7 289 aaKnown RBP13.62□□□□□ -0.23
COL5A1-201ENST00000371817 SFRP2Q96HF1 295 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 TREM2Q9NZC2 230 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 HLA-DQA1P01909 254 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 RPS27P42677 84 aaKnown RBP13.61□□□□□ -0.23
COL5A1-201ENST00000371817 CYB561P49447 251 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 SMAD4Q13485 552 aaKnown RBP13.61□□□□□ -0.23
COL5A1-201ENST00000371817 INSL4Q14641 139 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 WDR31Q8NA23 367 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 CSNK1EP49674 416 aaKnown RBP13.61□□□□□ -0.23
COL5A1-201ENST00000371817 RTP2Q5QGT7 225 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 PWWP2BQ6NUJ5 590 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 NUDT8Q8WV74 236 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 KLF16Q9BXK1 252 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-201ENST00000371817 TMEFF2Q9UIK5 374 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-201ENST00000371817 CLDN16Q9Y5I7 305 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 ZNF749O43361 778 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 CRYAAP02489 173 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 NUDT10Q8NFP7 164 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 OR2I1PQ8NGU4 316 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 NUDT11Q96G61 164 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 THYN1Q9P016 225 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 C12orf73Q69YU5 71 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 FLYWCH2Q96CP2 140 aaKnown RBP13.61□□□□□ -0.23
COL5A1-201ENST00000371817 GMPPAQ96IJ6 420 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-201ENST00000371817 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.61□□□□□ -0.23
COL5A1-201ENST00000371817 CIRBPQ14011 172 aaKnown RBP13.61□□□□□ -0.23
COL5A1-201ENST00000371817 OR4P4Q8NGL7 312 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 MRPL30Q8TCC3 161 aaKnown RBP13.61□□□□□ -0.23
COL5A1-201ENST00000371817 CHRNA10Q9GZZ6 450 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 TJP1Q07157 1748 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 HBZP02008 142 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 LPAR6P43657 344 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 ZXDAP98168 799 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 ADAMTSL4Q6UY14 1074 aa13.61□□□□□ -0.23
COL5A1-201ENST00000371817 ZNF107Q9UII5 783 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-201ENST00000371817 ZNF324O75467 553 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-201ENST00000371817 SMAGPQ0VAQ4 97 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 SPINK9Q5DT21 86 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 SH2D5Q6ZV89 423 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 TEX29Q8N6K0 151 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 COL14A1Q05707 1796 aaKnown RBP13.6□□□□□ -0.23
COL5A1-201ENST00000371817 NAAAQ02083 359 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 YRDCQ86U90 279 aaKnown RBP13.6□□□□□ -0.23
COL5A1-201ENST00000371817 SHANK1Q9Y566 2161 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 TAF1P21675 1872 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 KLRC4-KLRK1H3BQV0 150 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 LANCL1O43813 399 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 CHST1O43916 411 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 CDC14BO60729 498 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 BCL2P10415 239 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 NRIP2Q9BQI9 281 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 ZNF391Q9UJN7 358 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 ADAMTS5Q9UNA0 930 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 C1QTNF9BB2RNN3 333 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 PAGE4O60829 102 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 PITX3O75364 302 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 FCGR3BO75015 233 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 MOSPD3O75425 235 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 PTGESO14684 152 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 CA3P07451 260 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 CD22P20273 847 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 TMEM178AQ8NBL3 297 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 SNRNP40Q96DI7 357 aaKnown RBP13.6□□□□□ -0.23
COL5A1-201ENST00000371817 CTXND1A0A1B0GTU2 59 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 ZNF137PP52743 207 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 YPEL5P62699 121 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 CDKN3Q16667 212 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 ZNF683Q8IZ20 524 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 B9D1Q9UPM9 204 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 RAXQ9Y2V3 346 aa13.6□□□□□ -0.23
COL5A1-201ENST00000371817 F11RQ9Y624 299 aaKnown RBP13.6□□□□□ -0.23
COL5A1-201ENST00000371817 MOB3BQ86TA1 216 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 BEND2Q8NDZ0 799 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 FAM174AQ8TBP5 190 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 C5P01031 1676 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms