RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ZNF17P17021 662 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 SPINK2P20155 84 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 FCER1GP30273 86 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 PTGER4P35408 488 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 PRRX1P54821 245 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 IL24Q13007 206 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 KISS1Q15726 138 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 PRAMEF20Q5VT98 475 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 PTCRAQ6ISU1 281 aaPredicted RBP10.37□□□□□ -0.75
PTPN1-201ENST00000371621 MRPL54Q6P161 138 aaKnown RBP10.37□□□□□ -0.75
PTPN1-201ENST00000371621 TMEM252Q8N6L7 170 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 POC1AQ8NBT0 407 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 OR10S1Q8NGN2 331 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 DNAJB12Q9NXW2 375 aaKnown RBP10.37□□□□□ -0.75
PTPN1-201ENST00000371621 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 GAGE10A6NGK3 116 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 PPIHO43447 177 aaKnown RBP10.37□□□□□ -0.75
PTPN1-201ENST00000371621 GYPAP02724 150 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 POU2F2P09086 479 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 KLF3P57682 345 aaPredicted RBP10.37□□□□□ -0.75
PTPN1-201ENST00000371621 ZNF121P58317 390 aaPredicted RBP10.37□□□□□ -0.75
PTPN1-201ENST00000371621 CDC20BQ86Y33 519 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 ZNF547Q8IVP9 402 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 OR1K1Q8NGR3 316 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 GNRHR2Q96P88 292 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 UTP23Q9BRU9 249 aaKnown RBP10.37□□□□□ -0.75
PTPN1-201ENST00000371621 OR51B4Q9Y5P0 310 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 MYLKQ15746 1914 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 A0A1B0GUS0 222 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 CLEC18AA5D8T8 446 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 TMEM210A6NLX4 147 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 PRR32B1ATL7 298 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 HRASP01112 189 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 CEACAM8P31997 349 aaPredicted RBP10.37□□□□□ -0.75
PTPN1-201ENST00000371621 MFAP5Q13361 173 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 HLA-DRB5Q30154 266 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 PLCXD3Q63HM9 321 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 CLEC18CQ8NCF0 446 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 ZCCHC14Q8WYQ9 949 aaKnown RBP10.37□□□□□ -0.75
PTPN1-201ENST00000371621 NINJ1Q92982 152 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 RBKSQ9H477 322 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 MYO7BQ6PIF6 2116 aa10.37□□□□□ -0.75
PTPN1-201ENST00000371621 FAM166BA8MTA8 275 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 TNFSF4P23510 183 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 SLC6A8P48029 635 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 ZNF573Q86YE8 665 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 C1QL4Q86Z23 238 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 TMEM256Q8N2U0 113 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 C16orf52Q8NHV5 167 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 ACTR3CQ9C0K3 210 aaPredicted RBP10.36□□□□□ -0.75
PTPN1-201ENST00000371621 IL21Q9HBE4 155 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 CBLN1P23435 193 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 GPM6BQ13491 265 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 EXT1Q16394 746 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 PHF19Q5T6S3 580 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 NUFIP2Q7Z417 695 aaKnown RBP10.36□□□□□ -0.75
PTPN1-201ENST00000371621 ZNF595Q8IYB9 648 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 NUDT10Q8NFP7 164 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 RNASE8Q8TDE3 154 aaKnown RBP10.36□□□□□ -0.75
PTPN1-201ENST00000371621 ZFP30Q9Y2G7 519 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 ZNF835Q9Y2P0 537 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 TRBV5-5A0A0J9YX44 114 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 CIDEAO60543 219 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 ACRP10323 421 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 COMPP49747 757 aaPredicted RBP10.36□□□□□ -0.75
PTPN1-201ENST00000371621 CAMPP49913 170 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 EDDM3BP56851 147 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 LTC4SQ16873 150 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 BCORP1Q8N888 145 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 DMBX1Q8NFW5 382 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 RAB37Q96AX2 223 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 FAM234AQ9H0X4 552 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 MEGF9Q9H1U4 602 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 YBX2Q9Y2T7 364 aaKnown RBP10.36□□□□□ -0.75
PTPN1-201ENST00000371621 A0A0C4DFX4 3053 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 IFNL4K9M1U5 179 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 NDUFS8O00217 210 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 FAM53BQ14153 422 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 IZUMO4Q1ZYL8 232 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 HNRNPA1L2Q32P51 320 aaKnown RBP10.36□□□□□ -0.75
PTPN1-201ENST00000371621 FBLN7Q53RD9 439 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.36□□□□□ -0.751e-6■■■□□ 16.3
PTPN1-201ENST00000371621 ARHGEF39Q8N4T4 335 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 OR2Y1Q8NGV0 311 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 NAT6Q93015 286 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 RSPO3Q9BXY4 272 aaPredicted RBP10.36□□□□□ -0.75
PTPN1-201ENST00000371621 PECRQ9BY49 303 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 SMDT1Q9H4I9 107 aa10.36□□□□□ -0.75
PTPN1-201ENST00000371621 TDRD6O60522 2096 aaKnown RBP10.35□□□□□ -0.75
PTPN1-201ENST00000371621 C3orf85A0A1B0GTC6 90 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 OR7C2O60412 319 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 CYBAP13498 195 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 SLC25A1P53007 311 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 CSRP2Q16527 193 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 LIAT1Q6ZQX7 453 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 TCF23Q7RTU1 214 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 ALG14Q96F25 216 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 AKIRIN1Q9H9L7 192 aaPredicted RBP10.35□□□□□ -0.75
PTPN1-201ENST00000371621 MBNL1Q9NR56 388 aaKnown RBP10.35□□□□□ -0.75
PTPN1-201ENST00000371621 RNF150Q9ULK6 438 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms