RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 FBXW9Q5XUX1 488 aa24.8■■□□□ 1.56
SSBP3-204ENST00000371320 FBXL17Q9UF56 701 aa24.8■■□□□ 1.56
SSBP3-204ENST00000371320 SYNGR1O43759 233 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 ZNF273Q14593 569 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 BCL2L2Q92843 193 aaPredicted RBP24.79■■□□□ 1.56
SSBP3-204ENST00000371320 OR51B6Q9H340 312 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 ARID1AO14497 2285 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 TMEM218A2RU14 115 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 E5RGE8 158 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 DIRAS3O95661 229 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 DUSP1P28562 367 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 AKR1C2P52895 323 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 TMEM33P57088 247 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 AKR1C1Q04828 323 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 TRIP6Q15654 476 aaKnown RBP24.79■■□□□ 1.56
SSBP3-204ENST00000371320 HAGHLQ6PII5 290 aaPredicted RBP24.79■■□□□ 1.56
SSBP3-204ENST00000371320 NEK7Q8TDX7 302 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 NANOS1Q8WY41 292 aaKnown RBP24.79■■□□□ 1.56
SSBP3-204ENST00000371320 MMP26Q9NRE1 261 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 AMDHD2Q9Y303 409 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 NSG2Q9Y328 171 aa24.79■■□□□ 1.56
SSBP3-204ENST00000371320 HSPB6O14558 160 aa24.78■■□□□ 1.56
SSBP3-204ENST00000371320 TK1P04183 234 aa24.78■■□□□ 1.56
SSBP3-204ENST00000371320 SAT2Q96F10 170 aaPredicted RBP24.78■■□□□ 1.56
SSBP3-204ENST00000371320 MPC1Q9Y5U8 109 aa24.78■■□□□ 1.56
SSBP3-204ENST00000371320 SHANK1Q9Y566 2161 aa24.78■■□□□ 1.56
SSBP3-204ENST00000371320 TNRC6AQ8NDV7 1962 aaKnown RBP24.78■■□□□ 1.56
SSBP3-204ENST00000371320 MPPED1O15442 326 aa24.77■■□□□ 1.56
SSBP3-204ENST00000371320 NUPL2O15504 423 aaKnown RBP24.77■■□□□ 1.56
SSBP3-204ENST00000371320 PRKACAP17612 351 aa24.77■■□□□ 1.56
SSBP3-204ENST00000371320 MST1LQ2TV78 715 aa24.77■■□□□ 1.56
SSBP3-204ENST00000371320 MDP1Q86V88 176 aa24.77■■□□□ 1.56
SSBP3-204ENST00000371320 TMEM178AQ8NBL3 297 aa24.77■■□□□ 1.56
SSBP3-204ENST00000371320 LHFPL5Q8TAF8 219 aa24.77■■□□□ 1.56
SSBP3-204ENST00000371320 TP53RKQ96S44 253 aa24.77■■□□□ 1.56
SSBP3-204ENST00000371320 LILRA1O75019 489 aa24.77■■□□□ 1.56
SSBP3-204ENST00000371320 JTBO76095 146 aa24.77■■□□□ 1.56
SSBP3-204ENST00000371320 GAPDHP04406 335 aaKnown RBP24.77■■□□□ 1.56
SSBP3-204ENST00000371320 ATF4P18848 351 aaPredicted RBP24.77■■□□□ 1.56
SSBP3-204ENST00000371320 FAM185AQ8N0U4 392 aa24.77■■□□□ 1.56
SSBP3-204ENST00000371320 ZFP57Q9NU63 452 aa24.77■■□□□ 1.56
SSBP3-204ENST00000371320 C3orf85A0A1B0GTC6 90 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 SCTP09683 121 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 GNRHRP30968 328 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 TSC22D1Q15714 1073 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 TMEM268Q5VZI3 342 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 C5orf24Q7Z6I8 188 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 ZNF573Q86YE8 665 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 SMIM8Q96KF7 97 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 SMIM3Q9BZL3 60 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 PLK3Q9H4B4 646 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 ABCD4O14678 606 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 IL34Q6ZMJ4 242 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 MEX3BQ6ZN04 569 aaKnown RBP24.76■■□□□ 1.55
SSBP3-204ENST00000371320 TMPRSS7Q7RTY8 843 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 TMED3Q9Y3Q3 217 aa24.76■■□□□ 1.55
SSBP3-204ENST00000371320 CELSR3Q9NYQ7 3312 aa24.75■■□□□ 1.55
SSBP3-204ENST00000371320 OR5B21A6NL26 309 aa24.75■■□□□ 1.55
SSBP3-204ENST00000371320 ATG12O94817 140 aa24.75■■□□□ 1.55
SSBP3-204ENST00000371320 GNG3P63215 75 aa24.75■■□□□ 1.55
SSBP3-204ENST00000371320 FBXW12Q6X9E4 464 aa24.75■■□□□ 1.55
SSBP3-204ENST00000371320 OR52M1Q8NGK5 317 aa24.75■■□□□ 1.55
SSBP3-204ENST00000371320 ZNF488Q96MN9 340 aa24.75■■□□□ 1.55
SSBP3-204ENST00000371320 ZDHHC11Q9H8X9 412 aa24.75■■□□□ 1.55
SSBP3-204ENST00000371320 KIR2DS1A0A191URI9 304 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 KIR2DS4P43632 304 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 KIR2DS1Q14954 304 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 OR2T2Q6IF00 324 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 LINC00596Q86U02 117 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 ZNF565Q8N9K5 539 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 OR4A4PQ8NGN8 299 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 SECTM1Q8WVN6 248 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 HRH4Q9H3N8 390 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 SPACA1Q9HBV2 294 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 GP6Q9HCN6 339 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 TRDCB7Z8K6 153 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 FBXO24O75426 580 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 MED6O75586 246 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 SPINK2P20155 84 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 IL32P24001 234 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 SRPXP78539 464 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 PJVKQ0ZLH3 352 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 SPIN3Q5JUX0 258 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 SLC35G3Q8N808 338 aa24.74■■□□□ 1.55
SSBP3-204ENST00000371320 NKX6-2Q9C056 277 aaPredicted RBP24.74■■□□□ 1.55
SSBP3-204ENST00000371320 NOVA1P51513 510 aaKnown RBP24.73■■□□□ 1.55
SSBP3-204ENST00000371320 SRSF3P84103 164 aaKnown RBP24.73■■□□□ 1.55
SSBP3-204ENST00000371320 SUMF2Q8NBJ7 301 aa24.73■■□□□ 1.55
SSBP3-204ENST00000371320 ERGIC1Q969X5 290 aa24.73■■□□□ 1.55
SSBP3-204ENST00000371320 TSNAXQ99598 290 aaKnown RBP24.73■■□□□ 1.55
SSBP3-204ENST00000371320 ZNF175Q9Y473 711 aa24.73■■□□□ 1.55
SSBP3-204ENST00000371320 ST8SIA3O43173 380 aa24.73■■□□□ 1.55
SSBP3-204ENST00000371320 CA6P23280 308 aa24.73■■□□□ 1.55
SSBP3-204ENST00000371320 KCNJ3P48549 501 aa24.73■■□□□ 1.55
SSBP3-204ENST00000371320 SULT1A2P50226 295 aa24.73■■□□□ 1.55
SSBP3-204ENST00000371320 HERPUD1Q15011 391 aa24.73■■□□□ 1.55
SSBP3-204ENST00000371320 SPATA46Q5T0L3 261 aa24.73■■□□□ 1.55
SSBP3-204ENST00000371320 TBC1D26Q86UD7 250 aa24.73■■□□□ 1.55
SSBP3-204ENST00000371320 LDLRAD3Q86YD5 345 aa24.73■■□□□ 1.55
SSBP3-204ENST00000371320 TMEM222Q9H0R3 208 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms