RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 DTX3Q8N9I9 347 aa10.48□□□□□ -0.73
RPF1-201ENST00000370654 OR13C3Q8NGS6 347 aa10.48□□□□□ -0.73
RPF1-201ENST00000370654 LEAP2Q969E1 77 aa10.48□□□□□ -0.73
RPF1-201ENST00000370654 RFKQ969G6 155 aa10.48□□□□□ -0.73
RPF1-201ENST00000370654 MYDGFQ969H8 173 aa10.48□□□□□ -0.73
RPF1-201ENST00000370654 SPSB1Q96BD6 273 aa10.48□□□□□ -0.73
RPF1-201ENST00000370654 LGALS12Q96DT0 336 aa10.48□□□□□ -0.73
RPF1-201ENST00000370654 HRASLS5Q96KN8 279 aa10.48□□□□□ -0.73
RPF1-201ENST00000370654 SLC25A33Q9BSK2 321 aa10.48□□□□□ -0.73
RPF1-201ENST00000370654 EXOGQ9Y2C4 368 aaKnown RBP10.48□□□□□ -0.73
RPF1-201ENST00000370654 MYRFQ9Y2G1 1151 aa10.48□□□□□ -0.73
RPF1-201ENST00000370654 BUB1B-PAK6H3BSN5 160 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 K7EIL1 84 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 HSPB6O14558 160 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 DYNC1I1O14576 645 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 MT-ND2P03891 347 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 GABRB1P18505 474 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 CD34P28906 385 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 CCR9P51686 369 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 KRTAP10-11P60412 298 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 SNRPGP62308 76 aaKnown RBP10.47□□□□□ -0.73
RPF1-201ENST00000370654 ALKBH1Q13686 389 aaKnown RBP10.47□□□□□ -0.73
RPF1-201ENST00000370654 HLA-DRB5Q30154 266 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 KRBOX4Q5JUW0 171 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 SLC25A30Q5SVS4 291 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 REC114Q7Z4M0 266 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 CENPVQ7Z7K6 275 aaPredicted RBP10.47□□□□□ -0.73
RPF1-201ENST00000370654 STMN2Q93045 179 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 RBM14Q96PK6 669 aaKnown RBP10.47□□□□□ -0.73
RPF1-201ENST00000370654 ZCCHC4Q9H5U6 513 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 LIN7BQ9HAP6 207 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 NEK6Q9HC98 313 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 AMBNQ9NP70 447 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 IMPAD1Q9NX62 359 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 TAS2R3Q9NYW6 316 aa10.47□□□□□ -0.73
RPF1-201ENST00000370654 TRAV39A0A0B4J263 110 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 TRAV24A0A0B4J272 114 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 TCRBV4S1A1TA0A5B7 111 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 LEUTXA8MZ59 168 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 DEGS1O15121 323 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 OR2F2O95006 317 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 ZFPL1O95159 310 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 OR3A4PP47883 348 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 RBM39Q14498 530 aaKnown RBP10.46□□□□□ -0.74
RPF1-201ENST00000370654 KPNB1Q14974 876 aaKnown RBP10.46□□□□□ -0.74
RPF1-201ENST00000370654 LPCAT4Q643R3 524 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 ZBTB49Q6ZSB9 765 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 C18orf65Q6ZTR6 163 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 KCTD20Q7Z5Y7 419 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 RTN4RL2Q86UN3 420 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 ACBD7Q8N6N7 88 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 OR51A2Q8NGJ7 313 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 OR13A1Q8NGR1 328 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 TRUB1Q8WWH5 349 aaKnown RBP10.46□□□□□ -0.74
RPF1-201ENST00000370654 RGP1Q92546 391 aaPredicted RBP10.46□□□□□ -0.74
RPF1-201ENST00000370654 RBMXL1Q96E39 390 aaKnown RBP10.46□□□□□ -0.74
RPF1-201ENST00000370654 NR1H4Q96RI1 486 aaPredicted RBP10.46□□□□□ -0.74
RPF1-201ENST00000370654 PDCD1LG2Q9BQ51 273 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 KRTAP3-3Q9BYR6 98 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 GAL3ST2Q9H3Q3 398 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 INPP5EQ9NRR6 644 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 GLS2Q9UI32 602 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 DNAH9Q9NYC9 4486 aa10.46□□□□□ -0.74
RPF1-201ENST00000370654 A0A087X0M5 115 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 A0A1B0GX30 115 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 MPIG6BO95866 241 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 CSN2P05814 226 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 TMEM225BP0DP42 221 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 CD33P20138 364 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 NFYBP25208 207 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 PTGFRP43088 359 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 GTF2A1P52655 376 aaPredicted RBP10.45□□□□□ -0.74
RPF1-201ENST00000370654 KISS1Q15726 138 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 ZSCAN26Q16670 478 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 OR52W1Q6IF63 320 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 FAM53AQ6NSI3 398 aaPredicted RBP10.45□□□□□ -0.74
RPF1-201ENST00000370654 SAXO1Q8IYX7 474 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 OR10K1Q8NGX5 313 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 PLPPR1Q8TBJ4 325 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 ZNF596Q8TC21 504 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 KIRREL1Q96J84 757 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 ALG8Q9BVK2 526 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 KIF25Q9UIL4 384 aa10.45□□□□□ -0.74
RPF1-201ENST00000370654 WI2-2373I1.2A0A1W2PRP0 233 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 FAM90A18PA6NE21 464 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 FAM90A16PA6NEW6 464 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 FAM90A20PA6NIJ5 464 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 FAM90A9PA6NNJ1 464 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 FAM90A12PA8MX19 464 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 FAM90A5PA8MXJ8 464 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 H0YJX3 145 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 ALX3O95076 343 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 HCKP08631 526 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 FAM90A15PP0C7V4 464 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 FAM90A13PP0C7W8 464 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 FAM90A14PP0C7W9 464 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 FAM90A24PP0C7X0 464 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 OCM2P0CE71 109 aa10.44□□□□□ -0.74
RPF1-201ENST00000370654 OCMP0CE72 109 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms