RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 NXF5Q9H1B4 397 aaKnown RBP5.95□□□□□ -1.46
CSDE1-204ENST00000369530 ISG20L2Q9H9L3 353 aaKnown RBP5.95□□□□□ -1.46
CSDE1-204ENST00000369530 CALHM2Q9HA72 323 aa5.95□□□□□ -1.46
CSDE1-204ENST00000369530 NRIP3Q9NQ35 241 aa5.95□□□□□ -1.46
CSDE1-204ENST00000369530 SHPKQ9UHJ6 478 aa5.95□□□□□ -1.46
CSDE1-204ENST00000369530 IGKV3D-15A0A087WSY6 115 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 NDUFB8O95169 186 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 ARG1P05089 322 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF735P0CB33 412 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 NAA10P41227 235 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-204ENST00000369530 RHOGP84095 191 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 IL15RAQ13261 267 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 OR2T2Q6IF00 324 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 SLC25A42Q86VD7 318 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 LYG1Q8N1E2 194 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 IL22RA1Q8N6P7 574 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 TMEM229BQ8NBD8 167 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 OR2T33Q8NG76 320 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 OR10H4Q8NGA5 316 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 PFN4Q8NHR9 129 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 GPA33Q99795 319 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 TBL1XR1Q9BZK7 514 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 OR2J1Q9GZK6 312 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 MED20Q9H944 212 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 SLC17A5Q9NRA2 495 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-204ENST00000369530 RPH3ALQ9UNE2 315 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 POLR3KQ9Y2Y1 108 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-204ENST00000369530 IFITM5A6NNB3 132 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 CTAG2O75638 210 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 GYPBP06028 91 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 SELEP16581 610 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 PTGER4P35408 488 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 FBXW4P57775 412 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 DCAF7P61962 342 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 RANP62826 216 aaKnown RBP5.94□□□□□ -1.46
CSDE1-204ENST00000369530 ELOA3BQ3SY89 546 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 ACSM3Q53FZ2 586 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF766Q5HY98 468 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 ETFRF1Q6IPR1 90 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 KLHL24Q6TFL4 600 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 CPOQ8IVL8 374 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 ELOA3Q8NG57 546 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 OR1P1Q8NH06 330 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 OR51F2Q8NH61 342 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 SMIM12Q96EX1 92 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 GPR35Q9HC97 309 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 CBLN4Q9NTU7 201 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 OR5AC2Q9NZP5 309 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 HSPB7Q9UBY9 170 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 RIIAD1A6NNX1 92 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF208O43345 1280 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 CDC40O60508 579 aaKnown RBP eCLIP5.94□□□□□ -1.46
CSDE1-204ENST00000369530 GOSR1O95249 250 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 SYNGR4O95473 234 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 SLC2A10O95528 541 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 CST2P09228 141 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 AKR1C3P42330 323 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 ACAA2P42765 397 aaKnown RBP5.94□□□□□ -1.46
CSDE1-204ENST00000369530 TMEM33P57088 247 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 DAZAP2Q15038 168 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-204ENST00000369530 TEX43Q6ZNM6 134 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 GABRG1Q8N1C3 465 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 SIRT6Q8N6T7 355 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 SLC35G3Q8N808 338 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 BCORP1Q8N888 145 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 OR10G3Q8NGC4 313 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 OR13C2Q8NGS9 318 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 OR6K6Q8NGW6 343 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 BPIFA2Q96DR5 249 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 KTI12Q96EK9 354 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-204ENST00000369530 S100A16Q96FQ6 103 aaKnown RBP5.94□□□□□ -1.46
CSDE1-204ENST00000369530 TMEM56Q96MV1 263 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 OR52D1Q9H346 318 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 POFUT1Q9H488 388 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 GNG8Q9UK08 70 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 TMEM56-RWDD3S4R434 201 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 HIVEP3Q5T1R4 2406 aa5.94□□□□□ -1.46
CSDE1-204ENST00000369530 TRAV17A0A0B4J275 112 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 C20orf202A1L168 122 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 CD37P11049 281 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 PGAM2P15259 253 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 CXCR1P25024 350 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 MMP16P51512 607 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF136P52737 540 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 ERVFRD-1P60508 538 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 GUK1Q16774 197 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 PLPPR5Q32ZL2 321 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 KRTAP27-1Q3LI81 207 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 FAM27D1Q5T7N8 215 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 WDR73Q6P4I2 378 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 PRSS54Q6PEW0 395 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 ESPNLQ6ZVH7 1005 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF808Q8N4W9 903 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 GBGT1Q8N5D6 347 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 ZDHHC22Q8N966 263 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 ZSCAN4Q8NAM6 433 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 LFNGQ8NES3 379 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 OR4C3Q8NH37 302 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 CPNE2Q96FN4 548 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms